RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 NAT9Q9BTE0 207 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 SLC2A6Q9UGQ3 507 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 MUTYHQ9UIF7 546 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 PHTF1Q9UMS5 762 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 RPS6KL1Q9Y6S9 549 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 MAGEB16A2A368 324 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 HEATR9A2RTY3 570 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 MROH6A6NGR9 719 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 KPNA3O00505 521 aaPredicted RBP13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 IL1BP01584 269 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 SHBGP04278 402 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 COL9A1P20849 921 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 HNF1BP35680 557 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 SEMG2Q02383 582 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 ANKRD20A4Q4UJ75 823 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 SDE2Q6IQ49 451 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 BRAT1Q6PJG6 821 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 UNC5BQ8IZJ1 945 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 IQCKQ8N0W5 287 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 ARRDC3Q96B67 414 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 MRM3Q9HC36 420 aaKnown RBP13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 DKK3Q9UBP4 350 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 PRDM4Q9UKN5 801 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 PLAAQ9Y263 795 aa13.4□□□□□ -0.26
GTF2F2-201ENST00000340473 ZCWPW2A0A1B0GU75 182 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 A0A1W2PQF6 199 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TCRBV9S1A1TA0A576 114 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 CAPN8A6NHC0 703 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 C16orf96A6NNT2 1141 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 MAP2K7O14733 419 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 BUD23O43709 281 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 USP1O94782 785 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 POLBP06746 335 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 ABHD2P08910 425 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 CHRNB1P11230 501 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TSHRP16473 764 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 PSMD8P48556 350 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 STARD6P59095 220 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 PTPRCAPQ14761 206 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 UGP2Q16851 508 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TRMT10BQ6PF06 316 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 Q6ZS52 159 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 PARS2Q7L3T8 475 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TRMT11Q7Z4G4 463 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 GLT6D1Q7Z4J2 308 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 CACUL1Q86Y37 369 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 SIX5Q8N196 739 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 FBF1Q8TES7 1133 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 PTCD2Q8WV60 388 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 ZIM3Q96PE6 472 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 RSPH9Q9H1X1 276 aaPredicted RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 MAGEE1Q9HCI5 957 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TREX1Q9NSU2 369 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 POLR3BQ9NW08 1133 aaPredicted RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 IL1RAPL1Q9NZN1 696 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 PPIL1Q9Y3C6 166 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 NFS1Q9Y697 457 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 A0A1W2PQ67 120 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 NPIPB15A6NHN6 443 aaPredicted RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 A8MX80 341 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 PLK4O00444 970 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 PIAS1O75925 651 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 SLC4A1P02730 911 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 NUDT17P0C025 328 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 HOXB2P14652 356 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TIMP2P16035 220 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 ITGB7P26010 798 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 COPAP53621 1224 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 SMAD1Q15797 465 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 CDKN3Q16667 212 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 TSTD2Q5T7W7 516 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 MICALCLQ6ZW33 695 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 DSG4Q86SJ6 1040 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 UBALD2Q8IYN6 164 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 GJD3Q8N144 294 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 GSDMBQ8TAX9 411 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 HCAR2Q8TDS4 363 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 EID2BQ96D98 161 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 SCRN2Q96FV2 425 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 NECAB3Q96P71 396 aaPredicted RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 MCCC1Q96RQ3 725 aaPredicted RBP13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 CD248Q9HCU0 757 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 RABGEF1Q9UJ41 708 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 ZNF711Q9Y462 761 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 BPTFQ12830 3046 aa13.39□□□□□ -0.27
GTF2F2-201ENST00000340473 A0A087WUV0 522 aaPredicted RBP13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 GSTA2P09210 222 aa13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 PHBP35232 272 aa13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 ZNF140P52738 457 aaPredicted RBP13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 POLR2LP62875 67 aaKnown RBP13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 SATB1Q01826 763 aa13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 STARD3Q14849 445 aa13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 TAF1AQ15573 450 aaPredicted RBP13.38□□□□□ -0.27
GTF2F2-201ENST00000340473 CNGA3Q16281 694 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms