RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 GTF2H3Q13889 308 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 TLR1Q15399 786 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 ALFQ53S48 1182 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 MFSD4BQ5TF39 518 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 IQSEC1Q6DN90 963 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 DEFB128Q7Z7B8 93 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 GALNT15Q8N3T1 639 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 ACMSDQ8TDX5 336 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 FIG4Q92562 907 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 GPR63Q9BZJ6 419 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 UBE2OQ9C0C9 1292 aaKnown RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 ALG2Q9H553 416 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 MARCH2Q9P0N8 246 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 ARID1BQ8NFD5 2236 aaPredicted RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 TRPC5OSA6NMA1 111 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 I6L893 689 aaPredicted RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 GPR182O15218 404 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 RAP1GDS1P52306 607 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 DUSP4Q13115 394 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 NR6A1Q15406 480 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 LRRTM3Q86VH5 581 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 CANT1Q8WVQ1 401 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 SPATA17Q96L03 361 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 TMEM74Q96NL1 305 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 TLE6Q9H808 572 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 STX7O15400 261 aaKnown RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 MTSS1O43312 755 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 STRNO43815 780 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 CABYRO75952 493 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 ATP5F1P24539 256 aaPredicted RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 MAP4P27816 1152 aaKnown RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 NADK2Q4G0N4 442 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 HECTD2Q5U5R9 776 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 OR52E8Q6IFG1 317 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 CRYBG2Q8N1P7 616 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 BBS5Q8N3I7 341 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 CNGB3Q9NQW8 809 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 EXD2Q9NVH0 621 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 OXSMQ9NWU1 459 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 MARCH4Q9P2E8 410 aaPredicted RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 TRHDEQ9UKU6 1024 aa11.99□□□□□ -0.49
USP1-201ENST00000339950 TMA7Q9Y2S6 64 aaKnown RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 RBMX2Q9Y388 322 aaKnown RBP11.99□□□□□ -0.49
USP1-201ENST00000339950 CAPN14A8MX76 684 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 GSNP06396 782 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 SLC2A3P11169 496 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 CCNG1P51959 295 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 AP5B1Q2VPB7 878 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 SMYD5Q6GMV2 418 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 STK32CQ86UX6 486 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 SMG8Q8ND04 991 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 C17orf80Q9BSJ5 609 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 DGCR6LQ9BY27 220 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 NMUR1Q9HB89 426 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 PSMD13Q9UNM6 376 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 PKP3Q9Y446 797 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 ZCWPW2A0A1B0GU75 182 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 E9PAM4 449 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 NRP2O60462 931 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 SYNCRIPO60506 623 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 FBXO21O94952 628 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 HMOX2P30519 316 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 CDK7P50613 346 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 KCNK10P57789 538 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 RPS24P62847 133 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 GHRHRQ02643 423 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 TAF10Q12962 218 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 TRIM32Q13049 653 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 PTRHD1Q6GMV3 140 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 PAQR9Q6ZVX9 377 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 CACUL1Q86Y37 369 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 FBXO39Q8N4B4 442 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 CARNMT1Q8N4J0 409 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 CBR4Q8N4T8 237 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 PCYOX1LQ8NBM8 494 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 ZMIZ2Q8NF64 920 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 OR4K2Q8NGD2 314 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 TMEM174Q8WUU8 243 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 ANKRD49Q8WVL7 239 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 GKN1Q9NS71 199 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 PPP2R3BQ9Y5P8 575 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 RNASEH2AO75792 299 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 SNRPB2P08579 225 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 LTA4HP09960 611 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 SLC35E2BP0CK96 405 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 GATMP50440 423 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 TSNQ15631 228 aaKnown RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 DENND1CQ8IV53 801 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 RIN3Q8TB24 985 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 JADE3Q92613 823 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 SDCCAG3Q96C92 435 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 NR1H4Q96RI1 486 aaPredicted RBP11.98□□□□□ -0.49
USP1-201ENST00000339950 RMI1Q9H9A7 625 aa11.98□□□□□ -0.49
USP1-201ENST00000339950 A0A0J9YYE9 177 aa11.97□□□□□ -0.49
USP1-201ENST00000339950 SNNO75324 88 aaPredicted RBP11.97□□□□□ -0.49
USP1-201ENST00000339950 LRATO95237 230 aa11.97□□□□□ -0.49
USP1-201ENST00000339950 AOC1P19801 751 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms