RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PHC3Q8NDX5 983 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 PTCD2Q8WV60 388 aaKnown RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 JADE3Q92613 823 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 ZBED2Q9BTP6 218 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 MRM3Q9HC36 420 aaKnown RBP16.41■□□□□ 0.22
LITAF-201ENST00000339430 GMIPQ9P107 970 aa16.41■□□□□ 0.22
LITAF-201ENST00000339430 MAGEA13PA6NCF6 341 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 KCNA5P22460 613 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 HTR7P34969 479 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 ETFBP38117 255 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 ATXN3P54252 364 aaPredicted RBP16.4■□□□□ 0.22
LITAF-201ENST00000339430 PKNOX1P55347 436 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 TBX4P57082 545 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 PSRC1Q6PGN9 363 aaPredicted RBP16.4■□□□□ 0.22
LITAF-201ENST00000339430 TRIM67Q6ZTA4 783 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 LCA5Q86VQ0 697 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 CIR1Q86X95 450 aaPredicted RBP16.4■□□□□ 0.22
LITAF-201ENST00000339430 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 SLC39A11Q8N1S5 342 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 KDM1BQ8NB78 822 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 KYQ8NBH2 561 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 GDPD5Q8WTR4 605 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 PSMG2Q969U7 264 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 TMEM169Q96HH4 297 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 CNDP1Q96KN2 507 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 CDRT15Q96T59 188 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 MRPL57Q9BQC6 102 aaKnown RBP16.4■□□□□ 0.22
LITAF-201ENST00000339430 SLC25A51Q9H1U9 297 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 IGSF5Q9NSI5 407 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 VTI1BQ9UEU0 232 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 MTF2Q9Y483 593 aaPredicted RBP16.4■□□□□ 0.22
LITAF-201ENST00000339430 A0A087X1B8 175 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 GJB3O75712 270 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 LAG3P18627 525 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 SERPINH1P50454 418 aaKnown RBP16.4■□□□□ 0.22
LITAF-201ENST00000339430 TRIP10Q15642 601 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 OR52E8Q6IFG1 317 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 KIAA1841Q6NSI8 718 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 ADGRG6Q86SQ4 1221 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 CCDC117Q8IWD4 279 aaPredicted RBP16.4■□□□□ 0.22
LITAF-201ENST00000339430 NUP93Q8N1F7 819 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 ATAD1Q8NBU5 361 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 SP110Q9HB58 689 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 NCKIPSDQ9NZQ3 722 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 TLR6Q9Y2C9 796 aa16.4■□□□□ 0.22
LITAF-201ENST00000339430 HEATR9A2RTY3 570 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 OR51F1A6NGY5 319 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 H7C4K7 107 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 TBC1D4O60343 1298 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 RPL17P18621 184 aaKnown RBP16.39■□□□□ 0.21
LITAF-201ENST00000339430 POU4F1Q01851 419 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 MS4A13Q5J8X5 152 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 MARC1Q5VT66 337 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 SDCCAG8Q86SQ7 713 aaPredicted RBP16.39■□□□□ 0.21
LITAF-201ENST00000339430 PDSS2Q86YH6 399 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 RNF168Q8IYW5 571 aaPredicted RBP16.39■□□□□ 0.21
LITAF-201ENST00000339430 OR6P1Q8NGX9 317 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 RP9Q8TA86 221 aaKnown RBP16.39■□□□□ 0.21
LITAF-201ENST00000339430 PHF21BQ96EK2 531 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 IMP4Q96G21 291 aaKnown RBP16.39■□□□□ 0.21
LITAF-201ENST00000339430 HTATIP2Q9BUP3 242 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 PRKD2Q9BZL6 878 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 ZNF385DQ9H6B1 395 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 CLIC5Q9NZA1 410 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 PCDHB5Q9Y5E4 795 aa16.39■□□□□ 0.21
LITAF-201ENST00000339430 COPG1Q9Y678 874 aaKnown RBP16.39■□□□□ 0.21
LITAF-201ENST00000339430 SLCO1B7G3V0H7 640 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 H3BNX3 289 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 STX16-NPEPL1H3BU86 382 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 CCDC166P0CW27 439 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 POLD2P49005 469 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 RENBPP51606 427 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 THOP1P52888 689 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 AQP4P55087 323 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 RAP1GAP2Q684P5 730 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 C16orf89Q6UX73 402 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 MON1AQ86VX9 555 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 OR13J1Q8NGT2 312 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 SLC39A13Q96H72 371 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 PPP1R2P1Q96PQ5 205 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 NPAS2Q99743 824 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 ZYG11BQ9C0D3 744 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 TNFRSF12AQ9NP84 129 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 SPG21Q9NZD8 308 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 SCML2Q9UQR0 700 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 LYNP07948 512 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 MMP2P08253 660 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 ATP5F1P24539 256 aaPredicted RBP16.38■□□□□ 0.21
LITAF-201ENST00000339430 CCNHP51946 323 aaPredicted RBP16.38■□□□□ 0.21
LITAF-201ENST00000339430 HK2P52789 917 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 GPR17Q13304 367 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 HNRNPDQ14103 355 aaKnown RBP16.38■□□□□ 0.21
LITAF-201ENST00000339430 TECRLQ5HYJ1 363 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 BNC2Q6ZN30 1099 aaPredicted RBP16.38■□□□□ 0.21
LITAF-201ENST00000339430 KBTBD6Q86V97 674 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 CPSF7Q8N684 471 aaKnown RBP16.38■□□□□ 0.21
LITAF-201ENST00000339430 ANKRD49Q8WVL7 239 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 IGSF8Q969P0 613 aa16.38■□□□□ 0.21
LITAF-201ENST00000339430 FUBP3Q96I24 572 aaKnown RBP eCLIP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms