RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 PAGE2Q7Z2X7 111 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC9B2Q86UD5 537 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TSPYL5Q86VY4 417 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SEPT12Q8IYM1 358 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PDIK1LQ8N165 341 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GDPD1Q8N9F7 314 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC37A3Q8NCC5 494 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PPHLN1Q8NEY8 458 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NDNFQ8TB73 568 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 URGCPQ8TCY9 931 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TCP10LQ8TDR4 215 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 LURAP1Q96LR2 239 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MTG1Q9BT17 334 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FN3KQ9H479 309 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF334Q9HCZ1 680 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MED11Q9P086 117 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ASH2LQ9UBL3 628 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 KIF25Q9UIL4 384 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CDC14AQ9UNH5 594 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DTX4Q9Y2E6 619 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NRCAMQ92823 1304 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FAM237BA0A1B0GVD1 139 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MROH6A6NGR9 719 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 A8MX80 341 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PHYHO14832 338 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FAM13AO94988 1023 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GH1P01241 217 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CYP17A1P05093 508 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SBK2P0C263 348 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 HMGCLP35914 325 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ATP5OP48047 213 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CLCNKBP51801 687 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 INCA1Q0VD86 236 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MAB21L1Q13394 359 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DNASE1L3Q13609 305 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NEDD8Q15843 81 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF484Q5JVG2 852 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 COLEC12Q5KU26 742 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FAXCQ5TGI0 409 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NSMFQ6X4W1 530 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 FRMD5Q7Z6J6 570 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BHLHE22Q8NFJ8 381 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CPNE4Q96A23 557 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CENPNQ96H22 339 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TMEM41AQ96HV5 264 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GPR61Q9BZJ8 451 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SCUBE2Q9NQ36 999 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DNAJB9Q9UBS3 223 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CRYL1Q9Y2S2 319 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 V9GYQ6 96 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 IQGAP1P46940 1657 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 A0A087X0T9 212 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 AGAP5A6NIR3 686 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PRR5-ARHGAP8B1AHC4 643 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CDC7O00311 574 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 IFRD1O00458 451 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ADAM12O43184 909 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 OR2B3O76000 313 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ERBB2P04626 1255 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 HEXBP07686 556 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 HLA-EP13747 358 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NOS3P29474 1203 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NUBP1P53384 320 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ARHGAP8P85298 464 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DEFA6Q01524 100 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PMS2P3Q13401 168 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 POLD3Q15054 466 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GPR162Q16538 588 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 KIF19Q2TAC6 998 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF404Q494X3 552 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 TIGD7Q6NT04 549 aaPredicted RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RAB11FIP2Q7L804 512 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 LYSMD2Q8IV50 215 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 OR1M1Q8NGA1 313 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RFT1Q96AA3 541 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 ZHX1-C8orf76Q96EF9 292 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PAFAH2Q99487 392 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 APOL6Q9BWW8 343 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 DYRK4Q9NR20 520 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 KANSL3Q9P2N6 904 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GMPR2Q9P2T1 348 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 VTI1BQ9UEU0 232 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 MAB21L2Q9Y586 359 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 NUP153P49790 1475 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BICRAQ9NZM4 1560 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SETBP1Q9Y6X0 1596 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SDR42E2A6NKP2 422 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 LEUTXA8MZ59 168 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 AKAP8O43823 692 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GABARAPO95166 117 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BGNP21810 368 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CPOXP36551 454 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 GALCP54803 685 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RAB5BP61020 215 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 RHDQ02161 417 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 PDIA2Q13087 525 aaKnown RBP4.17□□□□□ -1.74
NEDD4-201ENST00000338963 CYP4F22Q6NT55 531 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 BBS12Q6ZW61 710 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 USP37Q86T82 979 aa4.17□□□□□ -1.74
NEDD4-201ENST00000338963 SLC26A11Q86WA9 606 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms