RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 HBP1O60381 514 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 ADAP00813 363 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 PDIA3P30101 505 aaKnown RBP2.4□□□□□ -2.02
XRCC4-202ENST00000338635 KRT9P35527 623 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 PNPLA4P41247 253 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 TMPOP42166 694 aaKnown RBP2.4□□□□□ -2.02
XRCC4-202ENST00000338635 GRIK2Q13002 908 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 THOC5Q13769 683 aaKnown RBP2.4□□□□□ -2.02
XRCC4-202ENST00000338635 PFKFB4Q16877 469 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 SOWAHAQ2M3V2 549 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 PPP6R3Q5H9R7 873 aaPredicted RBP2.4□□□□□ -2.02
XRCC4-202ENST00000338635 KCNT1Q5JUK3 1230 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 PDSS1Q5T2R2 415 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 KCTD8Q6ZWB6 473 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 RRAGAQ7L523 313 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 NOTCH2NLQ7Z3S9 236 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 KMT5CQ86Y97 462 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 RND1Q92730 232 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 ERGIC1Q969X5 290 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 TMEM41AQ96HV5 264 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 TNIP3Q96KP6 325 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 KXD1Q9BQD3 176 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 PABPC3Q9H361 631 aaKnown RBP2.4□□□□□ -2.02
XRCC4-202ENST00000338635 RPS10P5Q9NQ39 176 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 TMEM30AQ9NV96 361 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 PAK5Q9P286 719 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 IFT80Q9P2H3 777 aaPredicted RBP2.4□□□□□ -2.02
XRCC4-202ENST00000338635 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.02
XRCC4-202ENST00000338635 A0A087WV62 115 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 NR5A2O00482 541 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 DHX16O60231 1041 aaKnown RBP2.4□□□□□ -2.03
XRCC4-202ENST00000338635 NDUFB4O95168 129 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 SRD5A1P18405 259 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 RXRAP19793 462 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 CD72P21854 359 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 CHRNB4P30926 498 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 TECP42680 631 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 HLTFQ14527 1009 aaKnown RBP eCLIP2.4□□□□□ -2.03
XRCC4-202ENST00000338635 HSP90AB2PQ58FF8 381 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 SH2D4BQ5SQS7 431 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 SYCP2LQ5T4T6 812 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 SLC27A1Q6PCB7 646 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 GJB7Q6PEY0 223 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 KLHL17Q6TDP4 642 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 B3GNT6Q6ZMB0 384 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 NOL8Q76FK4 1167 aaKnown RBP2.4□□□□□ -2.03
XRCC4-202ENST00000338635 CHD1LQ86WJ1 897 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 ATG16L2Q8NAA4 619 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 DNAAF1Q8NEP3 725 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 TMEM170AQ8WVE7 144 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 TRAPPC9Q96Q05 1148 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 ELAC2Q9BQ52 826 aaKnown RBP2.4□□□□□ -2.03
XRCC4-202ENST00000338635 CTDSP1Q9GZU7 261 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 PCDH9Q9HC56 1237 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 NLRC4Q9NPP4 1024 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 ENTPD7Q9NQZ7 604 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 TLR8Q9NR97 1041 aaKnown RBP2.4□□□□□ -2.03
XRCC4-202ENST00000338635 HCFC1R1Q9NWW0 138 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 TMEM160Q9NX00 188 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 OGFRQ9NZT2 677 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 PCDHGB5Q9Y5G0 923 aa2.4□□□□□ -2.03
XRCC4-202ENST00000338635 ARID4BQ4LE39 1312 aaPredicted RBP2.39□□□□□ -2.03
XRCC4-202ENST00000338635 HHLA1C9JL84 531 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 EBAG9O00559 213 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 FFAR2O15552 330 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 SEPT4O43236 478 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 INHBAP08476 426 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 ITGA2P17301 1181 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 USP8P40818 1118 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 GNB1P62873 340 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF239Q16600 458 aaKnown RBP2.39□□□□□ -2.03
XRCC4-202ENST00000338635 ESCO2Q56NI9 601 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 CCNYL2Q5T2Q4 361 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 SYT13Q7L8C5 426 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 HERC6Q8IVU3 1022 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 WDR63Q8IWG1 891 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 PARP16Q8N5Y8 322 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 ZNF527Q8NB42 609 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 MAGEC3Q8TD91 643 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 ABTB1Q969K4 478 aaPredicted RBP2.39□□□□□ -2.03
XRCC4-202ENST00000338635 LRR1Q96L50 414 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 CDK19Q9BWU1 502 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 NPLQ9BXD5 320 aaPredicted RBP2.39□□□□□ -2.03
XRCC4-202ENST00000338635 WDR12Q9GZL7 423 aaKnown RBP2.39□□□□□ -2.03
XRCC4-202ENST00000338635 C17orf75Q9HAS0 396 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 GEMIN8Q9NWZ8 242 aaKnown RBP2.39□□□□□ -2.03
XRCC4-202ENST00000338635 MCM9Q9NXL9 1143 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.39□□□□□ -2.03
XRCC4-202ENST00000338635 PADI1Q9ULC6 663 aa2.39□□□□□ -2.03
XRCC4-202ENST00000338635 SMIM1B2RUZ4 78 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 AKR1B15C9JRZ8 316 aaPredicted RBP2.38□□□□□ -2.03
XRCC4-202ENST00000338635 MTA2O94776 668 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 IGLV1-44P01699 117 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 CSF1P09603 554 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 GPTP24298 496 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 RYKP34925 604 aa2.38□□□□□ -2.03
XRCC4-202ENST00000338635 GNL1P36915 607 aaPredicted RBP2.38□□□□□ -2.03
XRCC4-202ENST00000338635 HOXA1P49639 335 aaPredicted RBP2.38□□□□□ -2.03
XRCC4-202ENST00000338635 CLK1P49759 484 aaKnown RBP2.38□□□□□ -2.03
XRCC4-202ENST00000338635 TERF1P54274 439 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms