RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 LHCGRP22888 699 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 VIPR1P32241 457 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 HNF1BP35680 557 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 CHRNA4P43681 627 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 C2orf54Q08AI8 447 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 OLIG2Q13516 323 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 PTK6Q13882 451 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 SIM2Q14190 667 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 PTPRRQ15256 657 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 SLC1A5Q15758 541 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 SIRPB2Q5JXA9 342 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3GQ6DHY5 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3CQ6IPX1 549 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 KIAA1161Q6NSJ0 714 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 ERAP2Q6P179 960 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 CEP68Q76N32 757 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 LPCAT2Q7L5N7 544 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 KDELC2Q7Z4H8 507 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TMEFF1Q8IYR6 380 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TBC1D3Q8IZP1 549 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TAB3Q8N5C8 712 aaPredicted RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 PDCD7Q8N8D1 485 aaKnown RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 BIRC7Q96CA5 298 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 HSPA12BQ96MM6 686 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 ORAI3Q9BRQ5 295 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 FICDQ9BVA6 458 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 LRRC40Q9H9A6 602 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 ARNT2Q9HBZ2 717 aa16.11■□□□□ 0.17
LRRC28-202ENST00000331450 EIF2B3Q9NR50 452 aaKnown RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 TPX2Q9ULW0 747 aaKnown RBP16.11■□□□□ 0.17
LRRC28-202ENST00000331450 A0A1W2PQU0 124 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 GOLGA6CA6NDK9 693 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 GOLGA6BA6NDN3 693 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 PRR23AA6NEV1 266 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 PSMD3O43242 534 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 SUN1O94901 812 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 PCDH8O95206 1070 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 AGTP01019 485 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 FGF1P05230 155 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 GOLGA6DP0CG33 693 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 CYP2A6P11509 494 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-202ENST00000331450 NFKBIAP25963 317 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 PTGER3P43115 390 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 MAGEA6P43360 314 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 EPHB1P54762 984 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 FAM193AP78312 1265 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 DR1Q01658 176 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 SEMG2Q02383 582 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 DHX34Q14147 1143 aaKnown RBP16.1■□□□□ 0.17
LRRC28-202ENST00000331450 TRIP13Q15645 432 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-202ENST00000331450 ELF2Q15723 593 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 CNGA3Q16281 694 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 CDKN3Q16667 212 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 ZNF284Q2VY69 593 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 SEL1L3Q68CR1 1132 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 DENND5AQ6IQ26 1287 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 LIPIQ6XZB0 460 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 HORMAD1Q86X24 394 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 NDUFAF2Q8N183 169 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 CBARPQ8N350 705 aaPredicted RBP16.1■□□□□ 0.17
LRRC28-202ENST00000331450 FOXJ1Q92949 421 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 RMDN1Q96DB5 314 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 KRT12Q99456 494 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 TBL1YQ9BQ87 522 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 EBF2Q9HAK2 575 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 FAM86C1Q9NVL1 165 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 GOLGA6AQ9NYA3 693 aa16.1■□□□□ 0.17
LRRC28-202ENST00000331450 NEMP1O14524 444 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 USP12O75317 370 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 RHOBTB1O94844 696 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 HEXIM1O94992 359 aaKnown RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 GM2AP17900 193 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 VPS41P49754 854 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 RPS21P63220 83 aaKnown RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 BASP1P80723 227 aaKnown RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 GPS1Q13098 491 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 MSLNQ13421 630 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 FGL2Q14314 439 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 SPARCL1Q14515 664 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 KCNJ11Q14654 390 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 AGERQ15109 404 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 NAPEPLDQ6IQ20 393 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 CRTC1Q6UUV9 634 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 SYDE1Q6ZW31 735 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 TSPAN33Q86UF1 283 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 JAMLQ86YT9 394 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 DEFB119Q8N690 84 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 SUMF1Q8NBK3 374 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 ASB12Q8WXK4 309 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 DNASE2BQ8WZ79 361 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 ATOH1Q92858 354 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 APOL2Q9BQE5 337 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 WRAP53Q9BUR4 548 aaKnown RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 C1QTNF2Q9BXJ5 285 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 MAGEE1Q9HCI5 957 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 SMG5Q9UPR3 1016 aaKnown RBP16.09■□□□□ 0.17
LRRC28-202ENST00000331450 SPO11Q9Y5K1 396 aa16.09■□□□□ 0.17
LRRC28-202ENST00000331450 MUC6Q6W4X9 2439 aa16.08■□□□□ 0.17
LRRC28-202ENST00000331450 A0A0U1RQS6 177 aa16.08■□□□□ 0.16
LRRC28-202ENST00000331450 PSMD11O00231 422 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms