RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PLXNA2O75051 1894 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ADAMTS9Q9P2N4 1935 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TP53BP1Q12888 1972 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3DA0A087WVF3 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3IA0A087WXS9 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3EA0A087X179 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3KA0A087X1G2 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3FA6NER0 549 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3LB9A6J9 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 GOLGA6L19H0YKK7 550 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 CBX4O00257 560 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 POP4O95707 220 aaKnown RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 MT-CO1P00395 513 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 SERPING1P05155 500 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 CTSLP07711 333 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 C1SP09871 688 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3HP0C7X1 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 FOSL1P15407 271 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 VAV1P15498 845 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 RRM1P23921 792 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 CSNK1DP48730 415 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 ARRB1P49407 418 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 CSNK1EP49674 416 aaKnown RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 UBASH3AP57075 661 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TAS2R38P59533 333 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 RPL7AP62424 266 aaKnown RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 FANCCQ00597 558 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 RAD51Q06609 339 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 CNTN1Q12860 1018 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 SERINC3Q13530 473 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 PIGHQ14442 188 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 RFTN1Q14699 578 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 TRIP6Q15654 476 aaKnown RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 KIF19Q2TAC6 998 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 ERMARDQ5T6L9 678 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3GQ6DHY5 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3CQ6IPX1 549 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 ERN2Q76MJ5 926 aaKnown RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 ZNF571Q7Z3V5 609 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 ADAT2Q7Z6V5 191 aaKnown RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 HORMAD1Q86X24 394 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 LRRC49Q8IUZ0 686 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBC1D3Q8IZP1 549 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 TMEM145Q8NBT3 493 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 DENND6BQ8NEG7 585 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 OR7D4Q8NG98 312 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 OR2AP1Q8NGE2 309 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TEKT4Q8WW24 435 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 SERAC1Q96JX3 654 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TBATAQ96M53 351 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 GDAP1L1Q96MZ0 367 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 LENG8Q96PV6 779 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 TUBGCP5Q96RT8 1024 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 ELF4Q99607 663 aaPredicted RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 GDF3Q9NR23 364 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 GPR27Q9NS67 375 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 SEPT11Q9NVA2 429 aaKnown RBP6.43□□□□□ -1.38
SMG1-201ENST00000330588 DKK3Q9UBP4 350 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 SARDHQ9UL12 918 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 MSRB2Q9Y3D2 182 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 PCDHGA1Q9Y5H4 931 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMG1-201ENST00000330588 HS3ST3A1Q9Y663 406 aa6.43□□□□□ -1.38
SMG1-201ENST00000330588 TSPAN11A1L157 253 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 SYCE3A1L190 88 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 ARHGAP42A6NI28 874 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 FAM72CH0Y354 149 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 TLR4O00206 839 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 KPNA3O00505 521 aaPredicted RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 DDX3XO00571 662 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMG1-201ENST00000330588 SMAD6O43541 496 aaKnown RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 TNFSF14O43557 240 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 TSPAN6O43657 245 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 FBXO24O75426 580 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 LEFTY1O75610 366 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 FTLP02792 175 aaPredicted RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 ADRB3P13945 408 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 HNRNPA2B1P22626 353 aaKnown RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 EPHB2P29323 1055 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 AKT2P31751 481 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 CCNHP51946 323 aaPredicted RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 NXPH1P58417 271 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 TPI1P60174 286 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 RPS21P63220 83 aaKnown RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 SIM1P81133 766 aaPredicted RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 BOLA3Q53S33 107 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 ZNF805Q5CZA5 627 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 FAM72AQ5TYM5 149 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 AFMIDQ63HM1 303 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 E4F1Q66K89 784 aaPredicted RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 FAM72DQ6L9T8 149 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 RWDD4Q6NW29 188 aaKnown RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.42□□□□□ -1.38
SMG1-201ENST00000330588 DPY19L3Q6ZPD9 716 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 KANSL1Q7Z3B3 1105 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 ABI3BPQ7Z7G0 1075 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 LUZP1Q86V48 1076 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 FAM72BQ86X60 149 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 CACUL1Q86Y37 369 aa6.42□□□□□ -1.38
SMG1-201ENST00000330588 GIMAP7Q8NHV1 300 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms