RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 CXCR3P49682 368 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 RAB10P61026 200 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 HERC3Q15034 1050 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 PCSK7Q16549 785 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 CYP51A1Q16850 503 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 NOMO2Q5JPE7 1267 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 RBM20Q5T481 1227 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 RWDD4Q6NW29 188 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 SLC26A9Q7LBE3 791 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 DDIASQ8IXT1 998 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 DNAJB14Q8TBM8 379 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 FAM167AQ96KS9 214 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 PPP1R10Q96QC0 940 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 GPR22Q99680 433 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 RHOJQ9H4E5 214 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 GOLGA2P5Q9HBQ8 144 aa7.93□□□□□ -1.14
VMA21-201ENST00000330374 EIF2B3Q9NR50 452 aaKnown RBP7.93□□□□□ -1.14
VMA21-201ENST00000330374 MAN1A2O60476 641 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SNAP29O95721 258 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 CDH3P22223 829 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 IL10P22301 178 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 ELK4P28324 431 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 BCAP31P51572 246 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 PFKPQ01813 784 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 PIGFQ07326 219 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 BST2Q10589 180 aaKnown RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 RPS6KA2Q15349 733 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 DLK2Q6UY11 383 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 RETREG3Q86VR2 466 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 CAMK1DQ8IU85 385 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 ZMAT2Q96NC0 199 aaKnown RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 GPR20Q99678 358 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SIK2Q9H0K1 926 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 MRPL46Q9H2W6 279 aaKnown RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 FANCEQ9HB96 536 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 PRMT7Q9NVM4 692 aaPredicted RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 TSC22D4Q9Y3Q8 395 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 ST14Q9Y5Y6 855 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 TRIM24O15164 1050 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SERPINB7O75635 380 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 AKAP5P24588 427 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 GLUD2P49448 558 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 TUBA4AP68366 448 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 RFTN1Q14699 578 aaPredicted RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 CARTPTQ16568 116 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 ZNF789Q5FWF6 425 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 ERMP1Q7Z2K6 904 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 CMTR2Q8IYT2 770 aaKnown RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 TMCO5AQ8N6Q1 288 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 ANKRD52Q8NB46 1076 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 FAM174AQ8TBP5 190 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 EDEM1Q92611 657 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SGCDQ92629 289 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 MED10Q9BTT4 135 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 TBCCD1Q9NVR7 557 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 HACL1Q9UJ83 578 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 CNOT11Q9UKZ1 510 aaKnown RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 TCRBV3S1A0A5B6 114 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 PPP6CO00743 305 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 BEST1O76090 585 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 PCNAP12004 261 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 INSRRP14616 1297 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 FASP25445 335 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 PSMA4P25789 261 aaKnown RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 MATKP42679 507 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 APLP1P51693 650 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 BCAT1P54687 386 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SNX16P57768 344 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 NFKB2Q00653 900 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SQLEQ14534 574 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 CCDC85BQ15834 202 aaPredicted RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 TRIM16LQ309B1 348 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 ZNF829Q3KNS6 432 aaPredicted RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 PKDCCQ504Y2 493 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 FKBP1CQ5VVH2 108 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 HDAC10Q969S8 669 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 HDAC11Q96DB2 347 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 DGCR6LQ9BY27 220 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SNX25Q9H3E2 840 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 PDGFCQ9NRA1 345 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 SACM1LQ9NTJ5 587 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 CUEDC1Q9NWM3 386 aaPredicted RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 KIAA1257Q9ULG3 409 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 FAM50BQ9Y247 325 aa7.92□□□□□ -1.14
VMA21-201ENST00000330374 COL11A1P12107 1806 aaPredicted RBP7.92□□□□□ -1.14
VMA21-201ENST00000330374 KANSL1LA0AUZ9 987 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 NME4O00746 187 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 MATN1P21941 496 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 BDNFP23560 247 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 SLC1A2P43004 574 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CHRNA4P43681 627 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 GSTM4Q03013 218 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 MAPRE2Q15555 327 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 CCDC81Q6ZN84 652 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 DHRSXQ8N5I4 330 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 DQX1Q8TE96 717 aaKnown RBP7.91□□□□□ -1.14
VMA21-201ENST00000330374 C3orf30Q96M34 536 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 SLC25A23Q9BV35 468 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 FICDQ9BVA6 458 aa7.91□□□□□ -1.14
VMA21-201ENST00000330374 ING2Q9H160 280 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms