RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 MTF2Q9Y483 593 aaPredicted RBP14.63□□□□□ -0.07
TPM3-206ENST00000330188 ENPP3O14638 875 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 ALDH2P05091 517 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 HLA-DPA1P20036 260 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 RTP2Q5QGT7 225 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 CAPRIN2Q6IMN6 1127 aaKnown RBP14.62□□□□□ -0.07
TPM3-206ENST00000330188 TMEM154Q6P9G4 183 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 RPS27LQ71UM5 84 aaKnown RBP14.62□□□□□ -0.07
TPM3-206ENST00000330188 KBTBD6Q86V97 674 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 PELI3Q8N2H9 469 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 HIPK4Q8NE63 616 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 SH3RF2Q8TEC5 729 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 GIPC2Q8TF65 315 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 IFT43Q96FT9 208 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 FEM1CQ96JP0 617 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 DNAJC1Q96KC8 554 aaKnown RBP14.62□□□□□ -0.07
TPM3-206ENST00000330188 TBATAQ96M53 351 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 TSEN34Q9BSV6 310 aaKnown RBP14.62□□□□□ -0.07
TPM3-206ENST00000330188 STARD7Q9NQZ5 370 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 STK39Q9UEW8 545 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 PACSIN3Q9UKS6 424 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 PCDHB7Q9Y5E2 793 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 DPPA5A6NC42 116 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 NBNO60934 754 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 SKAP2O75563 359 aaPredicted RBP14.62□□□□□ -0.07
TPM3-206ENST00000330188 GOT2P00505 430 aaKnown RBP14.62□□□□□ -0.07
TPM3-206ENST00000330188 FGF1P05230 155 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 KCNQ1P51787 676 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 PLK1P53350 603 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 DUSP4Q13115 394 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 ZNF235Q14590 738 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 GPR158Q5T848 1215 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 FAM45BPQ6NSW5 357 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 PIM3Q86V86 326 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 SLC22A9Q8IVM8 553 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 LGI2Q8N0V4 545 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 CEP70Q8NHQ1 597 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 FAM45AQ8TCE6 357 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 FAR2Q96K12 515 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.62□□□□□ -0.072e-8■■□□□ 11.4
TPM3-206ENST00000330188 VPS28Q9UK41 221 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 ARL5AQ9Y689 179 aa14.62□□□□□ -0.07
TPM3-206ENST00000330188 NT5C1B-RDH14C9J2C7 533 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 F5H5T6 163 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 H3BNX3 289 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 LINGO3P0C6S8 592 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 RAG1P15918 1043 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 SELPP16109 830 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 GALNT3Q14435 633 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 PTPRCAPQ14761 206 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 GPNMBQ14956 572 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 C5orf22Q49AR2 442 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 BNC2Q6ZN30 1099 aaPredicted RBP14.61□□□□□ -0.07
TPM3-206ENST00000330188 CUZD1Q86UP6 607 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 PGAM4Q8N0Y7 254 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 CFAP52Q8N1V2 620 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 DBF4BQ8NFT6 615 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 BLOC1S5Q8TDH9 187 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 GATA6Q92908 595 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 PEX13Q92968 403 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 PHF21BQ96EK2 531 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 SERPINI1Q99574 410 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 ALG9Q9H6U8 611 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 MEAF6Q9HAF1 191 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 EML4Q9HC35 981 aaKnown RBP14.61□□□□□ -0.07
TPM3-206ENST00000330188 CRYL1Q9Y2S2 319 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 FIS1Q9Y3D6 152 aa14.61□□□□□ -0.07
TPM3-206ENST00000330188 SLC38A8A6NNN8 435 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ATF6P18850 670 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 FDXRP22570 491 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 HOXD9P28356 352 aaPredicted RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 SLC6A4P31645 630 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 SLC26A3P40879 764 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 KCNC1P48547 511 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 KPNA1P52294 538 aaPredicted RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 THOP1P52888 689 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 TIAL1Q01085 375 aaKnown RBP eCLIP14.6□□□□□ -0.07
TPM3-206ENST00000330188 GALNT1Q10472 559 aaPredicted RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 SMARCB1Q12824 385 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 BTG3Q14201 252 aaPredicted RBP14.6□□□□□ -0.07
TPM3-206ENST00000330188 SEMA3AQ14563 771 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 GSTA3Q16772 222 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ZNF423Q2M1K9 1284 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 PIGGQ5H8A4 983 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 LHX8Q68G74 356 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ALG1LQ6GMV1 187 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ZNF549Q6P9A3 640 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 CHSY3Q70JA7 882 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ISCA2Q86U28 154 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 GPR150Q8NGU9 434 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 SPDL1Q96EA4 605 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ZNF599Q96NL3 588 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 CDRT15Q96T59 188 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 GSTO2Q9H4Y5 243 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ACTL7AQ9Y615 435 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ANKRD36A6QL64 1941 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 A0A0D9SEW6 157 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 CCDC162PA2VCL2 907 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 TCAF2A6NFQ2 919 aa14.6□□□□□ -0.07
TPM3-206ENST00000330188 ARVCFO00192 962 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms