RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR2W6PQ8NHA6 318 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 TLCD1Q96CP7 247 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 CELF6Q96J87 481 aaKnown RBP16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 CYTH2Q99418 400 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 EBNA1BP2Q99848 306 aaKnown RBP16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 SPON2Q9BUD6 331 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 ACSS3Q9H6R3 686 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 VPS37BQ9H9H4 285 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 TMEM74BQ9NUR3 256 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 SENP1Q9P0U3 644 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 SERGEFQ9UGK8 458 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 SUN2Q9UH99 717 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 ADAM21Q9UKJ8 722 aa16.59■□□□□ 0.25
PDLIM1-201ENST00000329399 CXorf51AA0A1B0GTR3 108 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 EXOC1LA0A1B0GW35 172 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 ILVBLA1L0T0 632 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 POLR3GO15318 223 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 ZBTB24O43167 697 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 MAP3K13O43283 966 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 ATP9BO43861 1147 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 ZNF821O75541 412 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 EPN2O95208 641 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 SRCP12931 536 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 CES1P23141 567 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 PSMB4P28070 264 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 ELK3P41970 407 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 ST8SIA6P61647 398 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 SKOR1P84550 965 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 GNA12Q03113 381 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 SERINC3Q13530 473 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 FRG1Q14331 258 aaKnown RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 RFTN1Q14699 578 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 SF3A2Q15428 464 aaKnown RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 DLG2Q15700 870 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 KCTD19Q17RG1 926 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 KCTD11Q693B1 232 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 TCEAL6Q6IPX3 200 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 KDM7AQ6ZMT4 941 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 LEKR1Q6ZMV7 388 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 METTL3Q86U44 580 aaKnown RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 SH2D3CQ8N5H7 860 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 TEX26Q8N6G2 289 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 PDCD7Q8N8D1 485 aaKnown RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 KDM1BQ8NB78 822 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 TCEAL3Q969E4 200 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 TOE1Q96GM8 510 aaKnown RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 PWWP2AQ96N64 755 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 RSPH9Q9H1X1 276 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 CENPHQ9H3R5 247 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 GLOD4Q9HC38 313 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 VPS45Q9NRW7 570 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 WSB2Q9NYS7 404 aaPredicted RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 GMEB2Q9UKD1 530 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 SARDHQ9UL12 918 aa16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.58■□□□□ 0.24
PDLIM1-201ENST00000329399 PATE3B3GLJ2 98 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 CBX4O00257 560 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 PLK4O00444 970 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 GDF9O60383 454 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 CPP00450 1065 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 NR1D1P20393 614 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 ITPKAP23677 461 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 PI4KAP42356 2102 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 DHPSP49366 369 aaPredicted RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 GEMIN4P57678 1058 aaKnown RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 ARF5P84085 180 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 RPL6Q02878 288 aaKnown RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 CREB5Q02930 508 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 SLC14A2Q15849 920 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 PLA2G2CQ5R387 149 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 MARC1Q5VT66 337 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 Q6ZVU0 165 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 MMAAQ8IVH4 418 aaKnown RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 ARHGEF2Q92974 986 aaKnown RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 SIGLEC10Q96LC7 697 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 ACE2Q9BYF1 805 aaPredicted RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 SP110Q9HB58 689 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 SEMA4GQ9NTN9 838 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 BFARQ9NZS9 450 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 ZC3H7BQ9UGR2 993 aaKnown RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 SPEGQ15772 3267 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 PLXND1Q9Y4D7 1925 aa16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 CNOT1A5YKK6 2376 aaKnown RBP16.57■□□□□ 0.24
PDLIM1-201ENST00000329399 CHD5Q8TDI0 1954 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 TLDC2A0PJX2 215 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 ZNF217O75362 1048 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 RHOBTB1O94844 696 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 ACSL1P33121 698 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 SULT2A1Q06520 285 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 ZBTB17Q13105 803 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 MPP3Q13368 585 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 NAB1Q13506 487 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 ACCSLQ4AC99 568 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 MSS51Q4VC12 460 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 TP53INP2Q8IXH6 220 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 LOXL4Q96JB6 756 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 AGAP3Q96P47 875 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 SLC25A51Q9H1U9 297 aa16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 RBM22Q9NW64 420 aaKnown RBP eCLIP16.56■□□□□ 0.24
PDLIM1-201ENST00000329399 RABGEF1Q9UJ41 708 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms