RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 FEM1CQ96JP0 617 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 C9orf16Q9BUW7 83 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 SH3BP4Q9P0V3 963 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 LGALS13Q9UHV8 139 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 NEDD8-MDP1E9PL57 170 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 CALCAP01258 141 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 IL1BP01584 269 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 UBTFL6P0CB48 400 aaPredicted RBP11.46□□□□□ -0.58
COL4A5-201ENST00000328300 COX7A2P14406 83 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 PKMP14618 531 aaKnown RBP11.46□□□□□ -0.58
COL4A5-201ENST00000328300 GUCA1AP43080 201 aaPredicted RBP11.46□□□□□ -0.58
COL4A5-201ENST00000328300 PDE12Q6L8Q7 609 aaKnown RBP11.46□□□□□ -0.58
COL4A5-201ENST00000328300 DOK6Q6PKX4 331 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 TMEM26Q6ZUK4 368 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.58
COL4A5-201ENST00000328300 NPLOC4Q8TAT6 608 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 BRSK1Q8TDC3 778 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 COG5Q9UP83 839 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 RAI2Q9Y5P3 530 aa11.46□□□□□ -0.58
COL4A5-201ENST00000328300 SYNDIG1LA6NDD5 238 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 DNAJB1P25685 340 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 PSMD7P51665 324 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 GHRHRQ02643 423 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 ZNHIT3Q15649 155 aaPredicted RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TBCELQ5QJ74 424 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 SDHAF4Q5VUM1 108 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 GLMNQ92990 594 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 CCDC28BQ9BUN5 200 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 SLC7A4O43246 635 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 CNPP09543 421 aaKnown RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TNNI3P19429 210 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 CAP1Q01518 475 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 PFKFB4Q16877 469 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 LSM12Q3MHD2 195 aaKnown RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF618Q5T7W0 954 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TFAP2BQ92481 460 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TRMT13Q9NUP7 481 aaKnown RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 INSIG1O15503 277 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 AVILO75366 819 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 LDLRP01130 860 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 LLGL2Q6P1M3 1020 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 MAGED4Q96JG8 741 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 HEPHQ9BQS7 1158 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 B3GNT5Q9BYG0 378 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 INTS10Q9NVR2 710 aaKnown RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 SNX13Q9Y5W8 968 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 SERPINA6P08185 405 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 ANKS1BQ7Z6G8 1248 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 HDAC10Q969S8 669 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TCF25Q9BQ70 676 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TM6SF2Q9BZW4 377 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 ARHGAP39Q9C0H5 1083 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TSC22D4Q9Y3Q8 395 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 PCDHB9Q9Y5E1 797 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 NT5C1B-RDH14C9J2C7 533 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 LRIG2O94898 1065 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 GRIA4P48058 902 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 VAC14Q08AM6 782 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 CCDC85BQ15834 202 aaPredicted RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TTMPQ5BVD1 217 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 RNASEH2BQ5TBB1 312 aaKnown RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 SVOPQ8N4V2 548 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 ZBTB10Q96DT7 871 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 MUC13Q9H3R2 512 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 DUS2Q9NX74 493 aaKnown RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 WRAP73Q9P2S5 460 aaPredicted RBP11.45□□□□□ -0.58
COL4A5-201ENST00000328300 TRPC4Q9UBN4 977 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 RAB23Q9ULC3 237 aa11.45□□□□□ -0.58
COL4A5-201ENST00000328300 AZIN1O14977 448 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SNX3O60493 162 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 PDE9AO76083 593 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF682O95780 498 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ITGA2P17301 1181 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 HSPA14Q0VDF9 509 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 CAPN13Q6MZZ7 669 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 GALNT4Q8N4A0 578 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SRFBP1Q8NEF9 429 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 B4GALNT2Q8NHY0 566 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 NELL1Q92832 810 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 OTULINQ96BN8 352 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 APOL4Q9BPW4 351 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 UNC93B1Q9H1C4 597 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 C8orf4Q9NR00 106 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 CCL5P13501 91 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 DEFA1P59665 94 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 DEFA3P59666 94 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 TAF1AQ15573 450 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ASTE1Q2TB18 679 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 RIPOR1Q6ZS17 1223 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 FAM136AQ96C01 138 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 ZNF514Q96K75 400 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 FCRL5Q96RD9 977 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 TXNRD2Q9NNW7 524 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SEMA4BQ9NPR2 832 aaPredicted RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 KLHL20Q9Y2M5 609 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 LRRC72A6NJI9 287 aa11.44□□□□□ -0.58
COL4A5-201ENST00000328300 SNRPB2P08579 225 aaKnown RBP11.44□□□□□ -0.58
COL4A5-201ENST00000328300 HGFP14210 728 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms