RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TCRBV9S1A1TA0A576 114 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 LDB2O43679 373 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 ALDH1A2O94788 518 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 KLF8O95600 359 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 NMBRP28336 390 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 EIF3BP55884 814 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 POLR2LP62875 67 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 TAF1AQ15573 450 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 HSF5Q4G112 596 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 C2orf27AQ580R0 203 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 TSTD2Q5T7W7 516 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 USP45Q70EL2 814 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 GLT6D1Q7Z4J2 308 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 UHMK1Q8TAS1 419 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 PIP4K2CQ8TBX8 421 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 FCRL3Q96P31 734 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 ZIM3Q96PE6 472 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 LYSMD1Q96S90 227 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 MAGEE1Q9HCI5 957 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 TREX1Q9NSU2 369 aa10.29□□□□□ -0.76
VIPAS39-201ENST00000327028 ZCWPW2A0A1B0GU75 182 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 UPK3BL1B0FP48 263 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 UPK3BL2E5RIL1 263 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 C1QTNF3-AMACRE9PGA6 284 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 SYNCRIPO60506 623 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 RNF40O75150 1001 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 CRTAMO95727 393 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 SHBGP04278 402 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ALPIP09923 528 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 CTPS1P17812 591 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ITGB7P26010 798 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 STAT4Q14765 748 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 STARD3Q14849 445 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF449Q6P9G9 518 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 CES3Q6UWW8 571 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 CYS1Q717R9 158 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 UBALD2Q8IYN6 164 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 TTC30BQ8N4P2 665 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 FBF1Q8TES7 1133 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 PPP1R16AQ96I34 528 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ASB2Q96Q27 587 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 SMIM14Q96QK8 99 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 RSPH9Q9H1X1 276 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ACBD3Q9H3P7 528 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ACSS3Q9H6R3 686 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 FAM169AQ9Y6X4 670 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 SCN8AQ9UQD0 1980 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 C16orf96A6NNT2 1141 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 KPNA3O00505 521 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 C1QAP02745 245 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 PAMP19021 973 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 PSMA3P25788 255 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ABL2P42684 1182 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF140P52738 457 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 PDE1BQ01064 536 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ACVR1Q04771 509 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 IFFO1Q0D2I5 559 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 KLHL38Q2WGJ6 581 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 GLIPR1L2Q4G1C9 344 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 KIAA0930Q6ICG6 404 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 PARS2Q7L3T8 475 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 TXNDC5Q8NBS9 432 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 MDGA1Q8NFP4 955 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 OR2W6PQ8NHA6 318 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 MFSD3Q96ES6 412 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 SCRN2Q96FV2 425 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 SHDQ96IW2 340 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF778Q96MU6 729 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 CCDC77Q9BR77 488 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 MOCS1Q9NZB8 636 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 RABGEF1Q9UJ41 708 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 FBXL21Q9UKT6 434 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 SARDHQ9UL12 918 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 NDRG2Q9UN36 371 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 ARL5AQ9Y689 179 aa10.28□□□□□ -0.76
VIPAS39-201ENST00000327028 C2orf81A6NN90 581 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 ADAM23O75077 832 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 TCEA3O75764 348 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 IVLP07476 585 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 HOXB2P14652 356 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 TIMP2P16035 220 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 CD72P21854 359 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 NFKBIAP25963 317 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 HNF1BP35680 557 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 PSMD8P48556 350 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 ZNF844Q08AG5 666 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 LRRC32Q14392 662 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 LONRF1Q17RB8 773 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 EOGTQ5NDL2 527 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 FAM46CQ5VWP2 391 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 TRMT10BQ6PF06 316 aaKnown RBP10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 OR2T3Q8NH03 318 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 STYXQ8WUJ0 223 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 ARRDC3Q96B67 414 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 CERS2Q96G23 380 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 RUFY1Q96T51 708 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 CYTH2Q99418 400 aa10.27□□□□□ -0.76
VIPAS39-201ENST00000327028 TMEM109Q9BVC6 243 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms