RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TMEM9Q9P0T7 183 aa17.97■□□□□ 0.47
PRKCB-202ENST00000321728 TRHDEQ9UKU6 1024 aa17.97■□□□□ 0.47
PRKCB-202ENST00000321728 ERGIC3Q9Y282 383 aa17.97■□□□□ 0.47
PRKCB-202ENST00000321728 TRAF6Q9Y4K3 522 aa17.97■□□□□ 0.47
PRKCB-202ENST00000321728 C9JVG2 144 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 IPO13O94829 963 aaKnown RBP17.96■□□□□ 0.47
PRKCB-202ENST00000321728 ATP6V0D1P61421 351 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 TRIM16LQ309B1 348 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 VPS26BQ4G0F5 336 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 SYPL2Q5VXT5 272 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 FAM35AQ86V20 835 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 USP33Q8TEY7 942 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 ERLEC1Q96DZ1 483 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 TCAF1Q9Y4C2 921 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 CITO14578 2027 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 A0A0J9YYE9 177 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 A8MT66 165 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 ACOX3O15254 700 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 CD300CQ08708 224 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 CYP51A1Q16850 503 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 ESRP1Q6NXG1 681 aaKnown RBP17.96■□□□□ 0.47
PRKCB-202ENST00000321728 OTOP3Q7RTS5 596 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 UNC93AQ86WB7 457 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 COLGALT2Q8IYK4 626 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 SEZ6LQ9BYH1 1024 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 TRIM8Q9BZR9 551 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 FANCEQ9HB96 536 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 IFT80Q9P2H3 777 aaPredicted RBP17.96■□□□□ 0.47
PRKCB-202ENST00000321728 SLC30A1Q9Y6M5 507 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 MCM3APO60318 1980 aa17.96■□□□□ 0.47
PRKCB-202ENST00000321728 A0A087X1B8 175 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 ANGPT2O15123 496 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 INPP4BO15327 924 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 KCNH1O95259 989 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 SNAP29O95721 258 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 SLC1A2P43004 574 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 RPS9P46781 194 aaKnown RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 SEPT6Q14141 434 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 FAM187BQ17R55 369 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 CYBRD1Q53TN4 286 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 PKN3Q6P5Z2 889 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 SPRED1Q7Z699 444 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 PIGZQ86VD9 579 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 IFNEQ86WN2 208 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 BPIFB6Q8NFQ5 453 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 FEM1CQ96JP0 617 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 RPL10LQ96L21 214 aaKnown RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 HSFY1Q96LI6 401 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 MAP10Q9P2G4 905 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 STAP1Q9ULZ2 295 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 NCAM2O15394 837 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 B4GAT1O43505 415 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 E2F6O75461 281 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 GNL1P36915 607 aaPredicted RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 POLR2IP36954 125 aaKnown RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 LAMC2Q13753 1193 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 KYAT1Q16773 422 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 IL31Q6EBC2 164 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 ZNF470Q6ECI4 717 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 SLC15A3Q8IY34 581 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 ADGRG5Q8IZF4 528 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 DCPSQ96C86 337 aaKnown RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 ITPKCQ96DU7 683 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 C12orf42Q96LP6 360 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 MYRFLQ96LU7 910 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 HOPXQ9BPY8 73 aaPredicted RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 NFKBIZQ9BYH8 718 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 PDGFCQ9NRA1 345 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 TRIM64BA6NI03 449 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 C19orf81C9J6K1 198 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 MTSS1O43312 755 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 HBP1O60381 514 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 DAB1O75553 588 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 EDNRBP24530 442 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 CD151P48509 253 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 PCID2Q5JVF3 399 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 LDLRAP1Q5SW96 308 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 CELF3Q5SZQ8 465 aaKnown RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 DCAF15Q66K64 600 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 TRPV3Q8NET8 790 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 OR13F1Q8NGS4 319 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 SPATA22Q8NHS9 363 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 C18orf25Q96B23 403 aaPredicted RBP17.95■□□□□ 0.46
PRKCB-202ENST00000321728 CCDC126Q96EE4 140 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 TEKT5Q96M29 485 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 TUBA1CQ9BQE3 449 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 HEPHQ9BQS7 1158 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 IGSF5Q9NSI5 407 aa17.95■□□□□ 0.46
PRKCB-202ENST00000321728 ARPC2O15144 300 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 DYNC1LI2O43237 492 aaPredicted RBP17.94■□□□□ 0.46
PRKCB-202ENST00000321728 C22orf31O95567 290 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 MT-ND1P03886 318 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 ALDOCP09972 364 aaKnown RBP17.94■□□□□ 0.46
PRKCB-202ENST00000321728 MTHFD1P11586 935 aaKnown RBP17.94■□□□□ 0.46
PRKCB-202ENST00000321728 ADRA1BP35368 520 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 NDUFV1P49821 464 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 HLCSP50747 726 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 GRSF1Q12849 480 aaKnown RBP eCLIP17.94■□□□□ 0.46
PRKCB-202ENST00000321728 BFSP2Q13515 415 aa17.94■□□□□ 0.46
PRKCB-202ENST00000321728 CCNYL2Q5T2Q4 361 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms