RNA–Protein interactions for RNA: ENST00000320895.9

CLPTM1L-201, Transcript of CLPTM1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1L, Length 2,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-201ENST00000320895 VWA7Q9Y334 891 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 UBFD1O14562 309 aaKnown RBP24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 RAMP2O60895 175 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 DUSP4Q13115 394 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 ART3Q13508 389 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 SEMA3AQ14563 771 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 PTPRRQ15256 657 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 AAGABQ6PD74 315 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 RNF19BQ6ZMZ0 732 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 ZNF385DQ9H6B1 395 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 WDR41Q9HAD4 459 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 ZBTB26Q9HCK0 441 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 FBRSL1Q9HCM7 1045 aaKnown RBP24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 TMEM248Q9NWD8 314 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 CCDC167Q9P0B6 97 aa24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.3■■□□□ 1.48
CLPTM1L-201ENST00000320895 A0A087X1B8 175 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 PRDX6P30041 224 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 FOXB2Q5VYV0 432 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 NADSYN1Q6IA69 706 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 BNC2Q6ZN30 1099 aaPredicted RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 KBTBD6Q86V97 674 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 TMEM173Q86WV6 379 aaPredicted RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 OR9I1Q8NGQ6 314 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 RP9Q8TA86 221 aaKnown RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 FBXO44Q9H4M3 255 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.29■■□□□ 1.481e-6■□□□□ 8
CLPTM1L-201ENST00000320895 CAPN8A6NHC0 703 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 SUPT7LO94864 414 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 LYNP07948 512 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 LTA4HP09960 611 aaKnown RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 ATXN1LP0C7T5 689 aaKnown RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 LEPRP48357 1165 aaKnown RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 TAS1R1Q7RTX1 841 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 CUZD1Q86UP6 607 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 PTCD2Q8WV60 388 aaKnown RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 SLC45A3Q96JT2 553 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 PRKD2Q9BZL6 878 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 MRM3Q9HC36 420 aaKnown RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 ATP13A1Q9HD20 1204 aa24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 COL4A4P53420 1690 aaPredicted RBP24.29■■□□□ 1.48
CLPTM1L-201ENST00000320895 CCDC189A1A4V9 331 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 TCAF2A6NFQ2 919 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 LDB2O43679 373 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 IPO13O94829 963 aaKnown RBP24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 SIX3O95343 332 aaPredicted RBP24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 S1PR4O95977 384 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 FLOT2Q14254 428 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 PDSS2Q86YH6 399 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 CNDP1Q96KN2 507 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 GCNAQ96QF7 691 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 TRPC7Q9HCX4 862 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 C9JVG2 144 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 NDST2P52849 883 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 NFE2Q16621 373 aaPredicted RBP24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 AGAP9Q5VTM2 703 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 TRAF7Q6Q0C0 670 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 BHLHE22Q8NFJ8 381 aaPredicted RBP24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 OR7D4Q8NG98 312 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 HMGCLL1Q8TB92 370 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 SPPL2BQ8TCT7 592 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 PTERQ96BW5 349 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 NSMCE3Q96MG7 304 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 KLHL4Q9C0H6 718 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 ADA2Q9NZK5 511 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 VTI1BQ9UEU0 232 aa24.28■■□□□ 1.48
CLPTM1L-201ENST00000320895 MIA3Q5JRA6 1907 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 GOT2P00505 430 aaKnown RBP24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 LBRQ14739 615 aaKnown RBP24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 ZNF423Q2M1K9 1284 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 ZNF549Q6P9A3 640 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 ATP6V0D2Q8N8Y2 350 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 BTN2A3PQ96KV6 586 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 SPON2Q9BUD6 331 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 MAGEA13PA6NCF6 341 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 WASH4PA8MWX3 477 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 ARVCFO00192 962 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 PQBP1O60828 265 aaKnown RBP24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 RPL17P18621 184 aaKnown RBP24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 PFKPQ01813 784 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 PRSS55Q6UWB4 352 aaPredicted RBP24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 PIWIL4Q7Z3Z4 852 aaKnown RBP24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 IFT43Q96FT9 208 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 C8orf48Q96LL4 319 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 PCDHAC1Q9H158 963 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 VCXQ9H320 206 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 COPS7BQ9H9Q2 264 aaPredicted RBP24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 ARNT2Q9HBZ2 717 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 STK39Q9UEW8 545 aa24.27■■□□□ 1.48
CLPTM1L-201ENST00000320895 VNN2O95498 520 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 HTR7P34969 479 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 PRKAA2P54646 552 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 MSANTD2Q6P1R3 559 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 C16orf89Q6UX73 402 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 LGI2Q8N0V4 545 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 CPSF7Q8N684 471 aaKnown RBP24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 TTC16Q8NEE8 873 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 VPS45Q9NRW7 570 aa24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 GMPR2Q9P2T1 348 aaKnown RBP24.26■■□□□ 1.47
CLPTM1L-201ENST00000320895 CCDC162PA2VCL2 907 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms