RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 C8orf82Q6P1X6 216 aaPredicted RBP13.85□□□□□ -0.19
ATG4C-201ENST00000317868 ISCA2Q86U28 154 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 CUZD1Q86UP6 607 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 SLC22A9Q8IVM8 553 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 CCNYL1Q8N7R7 359 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 SH3RF2Q8TEC5 729 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 MYEOVQ96EZ4 313 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 FEM1CQ96JP0 617 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 BTBD9Q96Q07 612 aa13.85□□□□□ -0.19
ATG4C-201ENST00000317868 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATG4C-201ENST00000317868 MARCH4Q9P2E8 410 aaPredicted RBP13.85□□□□□ -0.19
ATG4C-201ENST00000317868 UXTQ9UBK9 157 aaPredicted RBP13.85□□□□□ -0.19
ATG4C-201ENST00000317868 PRAMEF11O60813 436 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 BCAS2O75934 225 aaPredicted RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 CCDC166P0CW27 439 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 IMPDH1P20839 514 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 PSMA3P25788 255 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 PBX3P40426 434 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 YBEYP58557 167 aaPredicted RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 PQLC1Q8N2U9 271 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 TRAPPC9Q96Q05 1148 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 TRMOQ9BU70 441 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 WDR41Q9HAD4 459 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 EFCAB1Q9HAE3 211 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 POPDC3Q9HBV1 291 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 RIMS3Q9UJD0 308 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 OR6C75A6NL08 312 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 UBFD1O14562 309 aaKnown RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 MUSKO15146 869 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 NEBLO76041 1014 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 RTN3O95197 1032 aaPredicted RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 TBX18O95935 607 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 EPOP01588 193 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 HNRNPLP14866 589 aaKnown RBP eCLIP13.84□□□□□ -0.192e-9■■■□□ 17.1
ATG4C-201ENST00000317868 FGFR3P22607 806 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 YWHAQP27348 245 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 MS4A2Q01362 244 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 RAP1GAP2Q684P5 730 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 FAM45BPQ6NSW5 357 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 ZNF549Q6P9A3 640 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 FAM45AQ8TCE6 357 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 SGF29Q96ES7 293 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 MARK4Q96L34 752 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 TUBGCP5Q96RT8 1024 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 TRIB3Q96RU7 358 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 CDRT15Q96T59 188 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 CRISPLD1Q9H336 500 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 EML4Q9HC35 981 aaKnown RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 PRSS51A0A1B0GVH4 220 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 AP1G1O43747 822 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 COL6A1P12109 1028 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 KCNC1P48547 511 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 SQLEQ14534 574 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 ZNF678Q5SXM1 525 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 ZFP1Q6P2D0 407 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 SLC43A3Q8NBI5 491 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 HDAC10Q969S8 669 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 PABPC5Q96DU9 382 aaKnown RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 MTF2Q9Y483 593 aaPredicted RBP13.84□□□□□ -0.19
ATG4C-201ENST00000317868 PCDHGA7Q9Y5G6 932 aa13.84□□□□□ -0.19
ATG4C-201ENST00000317868 TTC24A2A3L6 582 aaPredicted RBP13.83□□□□□ -0.2
ATG4C-201ENST00000317868 CD1DP15813 335 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 HLA-DPA1P20036 260 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 OR1G1P47890 313 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 ATP4BP51164 291 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 ACLYP53396 1101 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 LRP8Q14114 963 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 TYSND1Q2T9J0 566 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 KLC3Q6P597 504 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 PTAR1Q7Z6K3 402 aaPredicted RBP13.83□□□□□ -0.2
ATG4C-201ENST00000317868 ATAD1Q8NBU5 361 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 DLG3Q92796 817 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 PTERQ96BW5 349 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 ZNF599Q96NL3 588 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 ZIC5Q96T25 663 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 PPP1R12CQ9BZL4 782 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 TLR8Q9NR97 1041 aaKnown RBP13.83□□□□□ -0.2
ATG4C-201ENST00000317868 MARCH5Q9NX47 278 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 MARCH2Q9P0N8 246 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 KCTD3Q9Y597 815 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 MTMR11A4FU01 709 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 RAMP2O60895 175 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 GJB3O75712 270 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 FGF1P05230 155 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 MTA1Q13330 715 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 SEMA3AQ14563 771 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 POLD3Q15054 466 aaPredicted RBP13.83□□□□□ -0.2
ATG4C-201ENST00000317868 UGT3A2Q3SY77 523 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 PNPLA1Q8N8W4 532 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 FBXO32Q969P5 355 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.2
ATG4C-201ENST00000317868 RETREG1Q9H6L5 497 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 TRPC7Q9HCX4 862 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 SPATS2LQ9NUQ6 558 aaKnown RBP13.83□□□□□ -0.2
ATG4C-201ENST00000317868 TLL2Q9Y6L7 1015 aa13.83□□□□□ -0.2
ATG4C-201ENST00000317868 FBP2O00757 339 aa13.82□□□□□ -0.2
ATG4C-201ENST00000317868 UBTFL6P0CB48 400 aaPredicted RBP13.82□□□□□ -0.2
ATG4C-201ENST00000317868 HOXB8P17481 243 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms