RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 TMEM216Q9P0N5 145 aa6.69□□□□□ -1.34
ZNF540-201ENST00000316433 RCOR3Q9P2K3 495 aaPredicted RBP6.69□□□□□ -1.34
ZNF540-201ENST00000316433 EIF3KQ9UBQ5 218 aaKnown RBP6.69□□□□□ -1.34
ZNF540-201ENST00000316433 PCOLCE2Q9UKZ9 415 aa6.69□□□□□ -1.34
ZNF540-201ENST00000316433 MAPRE3Q9UPY8 281 aa6.69□□□□□ -1.34
ZNF540-201ENST00000316433 MYH9P35579 1960 aaKnown RBP6.69□□□□□ -1.34
ZNF540-201ENST00000316433 A8MUA0 341 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PDHXO00330 501 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 APOL1O14791 398 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PTP4A3O75365 173 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ASS1P00966 412 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PDGFAP04085 211 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TRIM49P0CI25 452 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TRIM49CP0CI26 452 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ITGA2P17301 1181 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CCND2P30279 289 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 HOXC13P31276 330 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CAP2P40123 477 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GP5P40197 560 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TSPAN7P41732 249 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GPX6P59796 221 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CSTF3Q12996 717 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PDIA2Q13087 525 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 DMP1Q13316 513 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 FAM187BQ17R55 369 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 FAM182AQ5T1J6 154 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CACHD1Q5VU97 1274 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GARNL3Q5VVW2 1013 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF544Q6NX49 715 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SYCE2Q6PIF2 218 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GADL1Q6ZQY3 521 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TAS1R3Q7RTX0 852 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PIWIL3Q7Z3Z3 882 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CCDC103Q8IW40 242 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 BBS7Q8IWZ6 715 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 OR2T3Q8NH03 318 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 DLG3Q92796 817 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TOP1MTQ969P6 601 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 HDAC11Q96DB2 347 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MCRS1Q96EZ8 462 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CNDP1Q96KN2 507 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TNIP3Q96KP6 325 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GLT1D1Q96MS3 346 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TEX13BQ9BXU2 312 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 RAVER2Q9HCJ3 691 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 VAT1LQ9HCJ6 419 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SDHAF3Q9NRP4 125 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 KCNH7Q9NS40 1196 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ANAPC7Q9UJX3 599 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ADAM28Q9UKQ2 775 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MRPS7Q9Y2R9 242 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MAFBQ9Y5Q3 323 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 DGKBQ9Y6T7 804 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MGAMO43451 1857 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 A0A0B4J269 797 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CLRN2A0PK11 232 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 DENND3A2RUS2 1198 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PRR23AA6NEV1 266 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 OR6C65A6NJZ3 312 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 HTRA2O43464 458 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TRIM16O95361 564 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TP53P04637 393 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PSKH1P11801 424 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 BMP4P12644 408 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CBLP22681 906 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CD40LGP29965 261 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CRHR1P34998 444 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SERPINB5P36952 375 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 NSFP46459 744 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MRPL19P49406 292 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SSTP61278 116 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 VBP1P61758 197 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 IL1RL1Q01638 556 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF252P-AS1Q0IIN9 211 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 MESDQ14696 234 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 RFTN1Q14699 578 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TARBP2Q15633 366 aaKnown RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 Q5BKY6 102 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 FSCBQ5H9T9 825 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 FAM124AQ86V42 546 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 RIOX2Q8IUF8 465 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CCDC117Q8IWD4 279 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 COLGALT2Q8IYK4 626 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 AGBL3Q8NEM8 1001 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 RSAD2Q8WXG1 361 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 FBXW5Q969U6 566 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF578Q96N58 590 aaPredicted RBP6.68□□□□□ -1.34
ZNF540-201ENST00000316433 TWNKQ96RR1 684 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CYP2S1Q96SQ9 504 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GDF15Q99988 308 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SEC22CQ9BRL7 303 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CBWD1Q9BRT8 395 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 HERPUD2Q9BSE4 406 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 CYP3A43Q9HB55 503 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SAYSD1Q9NPB0 183 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PRDM8Q9NQV8 689 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 SYBUQ9NX95 663 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 GLTPQ9NZD2 209 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 PRKAG2Q9UGJ0 569 aa6.68□□□□□ -1.34
ZNF540-201ENST00000316433 ADGRE2Q9UHX3 823 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms