RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 HERC3Q15034 1050 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 CTXN3Q4LDR2 81 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 RNF168Q8IYW5 571 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 ZBTB8BQ8NAP8 495 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 OR52K1Q8NGK4 314 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 P2RY11Q96G91 374 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 CIB1Q99828 191 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 OSBPL6Q9BZF3 934 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 EIF2B3Q9NR50 452 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 PNPLA3Q9NST1 481 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 MARCH5Q9NX47 278 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 USP3Q9Y6I4 520 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 OAZ2O95190 189 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 SAT1P21673 171 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 RPL10P27635 214 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 ADRA1BP35368 520 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 PDAP1Q13442 181 aaKnown RBP17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 Q6ZNX1 250 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 GK5Q6ZS86 529 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 CLVS1Q8IUQ0 354 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 CRIPAKQ8N1N5 446 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 ASB9Q96DX5 294 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 RANBP9Q96S59 729 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 DCUN1D5Q9BTE7 237 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 TBCCD1Q9NVR7 557 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 EBF1Q9UH73 591 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 TSC2P49815 1807 aa17.29■□□□□ 0.36
SCAMP4-201ENST00000316097 MSI1O43347 362 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 VARSP26640 1264 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 GLRBP48167 497 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 NUP107P57740 925 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 RFTN1Q14699 578 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 SLC44A4Q53GD3 710 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 RTP2Q5QGT7 225 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 DHRS4L2Q6PKH6 230 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 CCNYQ8ND76 341 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 RNF139Q8WU17 664 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 COLEC11Q9BWP8 271 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 KCNU1A8MYU2 1149 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 ARL4AP40617 200 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 PSME3P61289 254 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 NSUN2Q08J23 767 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 PRKAA1Q13131 559 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 LIPMQ5VYY2 423 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 PM20D1Q6GTS8 502 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 TAC4Q86UU9 113 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 FIBCD1Q8N539 461 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 CNTD1Q8N815 330 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 NMUR1Q9HB89 426 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 OSER1Q9NX31 292 aa17.28■□□□□ 0.36
SCAMP4-201ENST00000316097 H0YJX3 145 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 TNFRSF10BO14763 440 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 ADSLP30566 484 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 PRAMEP78395 509 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 ANKDD1AQ495B1 522 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 PRSS55Q6UWB4 352 aaPredicted RBP17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 RNF34Q969K3 372 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 SCYL1Q96KG9 808 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 TKTL2Q9H0I9 626 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 CRISPLD1Q9H336 500 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 LRRC40Q9H9A6 602 aa17.27■□□□□ 0.36
SCAMP4-201ENST00000316097 HACD1B0YJ81 288 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 TMEM233B4DJY2 109 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 FOXD2O60548 495 aaPredicted RBP17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 GALTP07902 379 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 TFPTP0C1Z6 253 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 RPL17P18621 184 aaKnown RBP17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 CD97P48960 835 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 NAA20P61599 178 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 RALGDSQ12967 914 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 TRIM25Q14258 630 aaKnown RBP17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 ELMSAN1Q6PJG2 1045 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 CYP2R1Q6VVX0 501 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 ZYG11AQ6WRX3 759 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 GPR141Q7Z602 305 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 HERC6Q8IVU3 1022 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 FAM47BQ8NA70 645 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 GIPC3Q8TF64 312 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 VWCEQ96DN2 955 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 WDCPQ9H6R7 721 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 ELAC1Q9H777 363 aaKnown RBP17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 CLK4Q9HAZ1 481 aaKnown RBP17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 SLC39A10Q9ULF5 831 aa17.27■□□□□ 0.35
SCAMP4-201ENST00000316097 E7ENX8 843 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 C8BP07358 591 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 ITGB8P26012 769 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 TUBA4AP68366 448 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 MAPRE1Q15691 268 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 ANKRD33Q7Z3H0 272 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 SCD5Q86SK9 330 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 ZNF567Q8N184 647 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 DQX1Q8TE96 717 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 ISOC1Q96CN7 298 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 SIK2Q9H0K1 926 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 NOL11Q9H8H0 719 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 ZNHIT2Q9UHR6 403 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 MID2Q9UJV3 735 aa17.26■□□□□ 0.35
SCAMP4-201ENST00000316097 FBXW11Q9UKB1 542 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms