RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 SLC35C2Q9NQQ7 365 aa12.39□□□□□ -0.43
EBF1-201ENST00000313708 RASSF1Q9NS23 344 aa12.39□□□□□ -0.43
EBF1-201ENST00000313708 RIC8BQ9NVN3 520 aa12.39□□□□□ -0.43
EBF1-201ENST00000313708 INTS10Q9NVR2 710 aaKnown RBP12.39□□□□□ -0.43
EBF1-201ENST00000313708 EMC3Q9P0I2 261 aa12.39□□□□□ -0.43
EBF1-201ENST00000313708 XPR1Q9UBH6 696 aa12.39□□□□□ -0.43
EBF1-201ENST00000313708 ANKRD6Q9Y2G4 727 aa12.39□□□□□ -0.43
EBF1-201ENST00000313708 FNDC3AQ9Y2H6 1198 aaKnown RBP12.39□□□□□ -0.43
EBF1-201ENST00000313708 SNNO75324 88 aaPredicted RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 GPIP06744 558 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 CD48P09326 243 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 TAL1P17542 331 aaPredicted RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 CASP3P42574 277 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 RAP1GAPP47736 663 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 PFKPQ01813 784 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 KLF1Q13351 362 aaPredicted RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 ZNF404Q494X3 552 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 DPY19L3Q6ZPD9 716 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 OTOP3Q7RTS5 596 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 PIGBQ92521 554 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 THG1LQ9NWX6 298 aaKnown RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 BCKDKO14874 412 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 TPH1P17752 444 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 CYP2F1P24903 491 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 FMO3P31513 532 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 DSG3P32926 999 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 PPP5CP53041 499 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 PLA2G16P53816 162 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 SNRPD2P62316 118 aaKnown RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 RACK1P63244 317 aaKnown RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 CCNA1P78396 465 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 SPCS2Q15005 226 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 DHRS4L2Q6PKH6 230 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 LSM14AQ8ND56 463 aaKnown RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 TOP1MTQ969P6 601 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 HOPXQ9BPY8 73 aaPredicted RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 C14orf119Q9NWQ9 140 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 B8ZZF3 427 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 LRIG2O94898 1065 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 C8BP07358 591 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 SYT16Q17RD7 645 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 ADHFE1Q8IWW8 467 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 MCPH1Q8NEM0 835 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 TBCDQ9BTW9 1192 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 TDRD1Q9BXT4 1180 aaKnown RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 TSR3Q9UJK0 312 aaKnown RBP12.38□□□□□ -0.43
EBF1-201ENST00000313708 B4GAT1O43505 415 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 PLOD3O60568 738 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.38□□□□□ -0.43
EBF1-201ENST00000313708 AHSA2Q719I0 299 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 SLC9A9Q8IVB4 645 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 LRRC17Q8N6Y2 441 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 NIF3L1Q9GZT8 377 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 ZBTB26Q9HCK0 441 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 TAS2R9Q9NYW1 312 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 PCDHGA7Q9Y5G6 932 aa12.38□□□□□ -0.43
EBF1-201ENST00000313708 SUPT3HB4E1H0 165 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 SLC22A2O15244 555 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 TSPAN19P0C672 248 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 IL1R1P14778 569 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 CD40LGP29965 261 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 PLA2G4EQ3MJ16 856 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 SLC41A1Q8IVJ1 513 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 TRIM48Q8IWZ4 208 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 UNC5BQ8IZJ1 945 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 PIPSLA2A3N6 862 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 TK2O00142 265 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 STILQ15468 1287 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 FAM122CQ6P4D5 195 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 NDNFQ8TB73 568 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 SNAPC3Q92966 411 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 ZNF518BQ9C0D4 1074 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 SPRTNQ9H040 489 aaPredicted RBP12.37□□□□□ -0.43
EBF1-201ENST00000313708 CHRAC1Q9NRG0 131 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 ACTR3BQ9P1U1 418 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 ASTN2O75129 1339 aaPredicted RBP12.37□□□□□ -0.43
EBF1-201ENST00000313708 MEN1O00255 615 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 NTRK1P04629 796 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 C2P06681 752 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 OLR1P78380 273 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 UTP15Q8TED0 518 aaKnown RBP12.37□□□□□ -0.43
EBF1-201ENST00000313708 TFAP2CQ92754 450 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 TSPAN17Q96FV3 270 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 CPSF3Q9UKF6 684 aaKnown RBP12.37□□□□□ -0.43
EBF1-201ENST00000313708 ATP6V1G2-DDX39BF2Z307 99 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 C4BPBP20851 252 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 GRIK1P39086 918 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 AP3M2P53677 418 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 SCN1BQ07699 218 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 ZC3H12BQ5HYM0 836 aaKnown RBP12.37□□□□□ -0.43
EBF1-201ENST00000313708 ARHGAP17Q68EM7 881 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 DSN1Q9H410 356 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 RAVER2Q9HCJ3 691 aaKnown RBP12.37□□□□□ -0.43
EBF1-201ENST00000313708 MID1IP1Q9NPA3 183 aa12.37□□□□□ -0.43
EBF1-201ENST00000313708 FARSBQ9NSD9 589 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms