RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TRAPPC5Q8IUR0 188 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 LEMD2Q8NC56 503 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 GLIS3Q8NEA6 775 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 TEFMQ96QE5 360 aaKnown RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 TELO2Q9Y4R8 837 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 CCDC189A1A4V9 331 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 AGRPO00253 132 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 PGK1P00558 417 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 AXLP30530 894 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 GALNT18Q6P9A2 607 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 SLC34A3Q8N130 599 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 HSFY1Q96LI6 401 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 RBMX2Q9Y388 322 aaKnown RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 DDTLA6NHG4 134 aaPredicted RBP13.74□□□□□ -0.21
CLCN6-201ENST00000312413 MDM4O15151 490 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 KLRC4O43908 158 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 OR5F1O95221 314 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 SEPHS1P49903 392 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 CDH22Q9UJ99 828 aa13.74□□□□□ -0.21
CLCN6-201ENST00000312413 NFASCO94856 1347 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 IRGMA1A4Y4 181 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 A8MX80 341 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 NKRFO15226 690 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 SERPINB7O75635 380 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 MTA2O94776 668 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 CALCAP01258 141 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 TLX1P31314 330 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 FAUP35544 74 aaKnown RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 RPL4P36578 427 aaKnown RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 GPAT3Q53EU6 434 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 ECHDC2Q86YB7 292 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 C12orf56Q8IXR9 622 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 OR52K2Q8NGK3 314 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 TMEM106CQ9BVX2 250 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 SAMD4AQ9UPU9 718 aaKnown RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 TRAF6Q9Y4K3 522 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 PCDHGA4Q9Y5G9 962 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 PLK4O00444 970 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 BDNFP23560 247 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 ADSLP30566 484 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 GJA8P48165 433 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 PTPN5P54829 565 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 ZNHIT3Q15649 155 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 TMEM86AQ8N2M4 240 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 C1GALT1C1Q96EU7 318 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 PGLYRP2Q96PD5 576 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 DHX33Q9H6R0 707 aaKnown RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 SP140LQ9H930 580 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 A0A0J9YYE9 177 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 THRBP10828 461 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 CCNHP51946 323 aaPredicted RBP13.73□□□□□ -0.21
CLCN6-201ENST00000312413 RD3Q7Z3Z2 195 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 OR2T34Q8NGX1 318 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 OR2T3Q8NH03 318 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 HM13Q8TCT9 377 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 COL26A1Q96A83 441 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 MNTQ99583 582 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 SLC35C2Q9NQQ7 365 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 ADGRE2Q9UHX3 823 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 ASTN1O14525 1302 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 PCP4L1A6NKN8 68 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 AP3D1O14617 1153 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 RGS10O43665 173 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 CCNE2O96020 404 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 CTSKP43235 329 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 ITGA7Q13683 1181 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 ZNF410Q86VK4 478 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 SPATA6LQ8N4H0 392 aa13.73□□□□□ -0.21
CLCN6-201ENST00000312413 TAL1P17542 331 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CTBP1Q13363 440 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 TNFAIP8L3Q5GJ75 292 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 C6orf52Q5T4I8 152 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 MARCH2Q9P0N8 246 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 PLLPQ9Y342 182 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 DGKBQ9Y6T7 804 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ZNF879B4DU55 563 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ADRB2P07550 413 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 ENPEPQ07075 957 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CBX3Q13185 183 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 R3HCC1LQ7Z5L2 792 aaKnown RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 CUZD1Q86UP6 607 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 NKX2-3Q8TAU0 364 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 DNAJB3Q8WWF6 145 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 TPK1Q9H3S4 243 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 WDR55Q9H6Y2 383 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 LRRC4CQ9HCJ2 640 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 GPN1Q9HCN4 374 aaPredicted RBP13.72□□□□□ -0.21
CLCN6-201ENST00000312413 MOXD2PA6NHM9 499 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 SLC6A2P23975 617 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 SHMT1P34896 483 aa13.72□□□□□ -0.21
CLCN6-201ENST00000312413 NOMO3P69849 1222 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms