RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 HIST1H2AGP0C0S8 130 aaPredicted RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 HIST1H2ADP20671 130 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 LPOP22079 712 aaPredicted RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MGAT1P26572 445 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 PLOD1Q02809 727 aaPredicted RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 GPR158Q5T848 1215 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 WLSQ5T9L3 541 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TIFABQ6ZNK6 161 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 STRA8Q7Z7C7 330 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 LRRN4CLQ8ND94 238 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ADAM32Q8TC27 787 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 HIST1H2AHQ96KK5 128 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TRAPPC9Q96Q05 1148 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CCT8L2Q96SF2 557 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 HIST1H2AJQ99878 128 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 H2AFJQ9BTM1 129 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MLPHQ9BV36 600 aaPredicted RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 RHOJQ9H4E5 214 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TAS2R13Q9NYV9 303 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TMEM5Q9Y2B1 443 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TNPO3Q9Y5L0 923 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ZSWIM8A7E2V4 1837 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 RALGAPA2Q2PPJ7 1873 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 F8W810 466 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MATN2O00339 956 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TRAFD1O14545 582 aaPredicted RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MAGEC1O60732 1142 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SOCS5O75159 536 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SERPINE1P05121 402 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TPBGLP0DKB5 382 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ATF4P18848 351 aaPredicted RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ABCE1P61221 599 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 GBE1Q04446 702 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ELP6Q0PNE2 266 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 GPM6BQ13491 265 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 BLMHQ13867 455 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 STARD3Q14849 445 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TMEM259Q4ZIN3 620 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SMUG1Q53HV7 270 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MS4A13Q5J8X5 152 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 NEPROQ6NW34 567 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 AADACL2Q6P093 401 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 RHBDF2Q6PJF5 856 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TXNDC11Q6PKC3 985 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 NPNTQ6UXI9 565 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 FAM47EQ6ZV65 393 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MTSS1LQ765P7 747 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TAS2R42Q7RTR8 314 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 YTHDF3Q7Z739 585 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ZNF567Q8N184 647 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 PCDH20Q8N6Y1 951 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 EPS8L3Q8TE67 593 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ZNF473Q8WTR7 871 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CCDC138Q96M89 665 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 LRRC37BQ96QE4 947 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CLPBQ9H078 707 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SLC28A3Q9HAS3 691 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 POPDC3Q9HBV1 291 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CASS4Q9NQ75 786 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 RIC8BQ9NVN3 520 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SNX5Q9Y5X3 404 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 DPPA5A6NC42 116 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MAGEA13PA6NCF6 341 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SGTAO43765 313 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 PRAMEF11O60813 436 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CBFA2T3O75081 653 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 RPP40O75818 363 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SMNDC1O75940 238 aaKnown RBP eCLIP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 POP4O95707 220 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SYF2O95926 243 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 GSTM1P09488 218 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 S100A5P33763 92 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 MTHFRP42898 656 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CSNK1DP48730 415 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CACNA2D1P54289 1103 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 WNT3AP56704 352 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 GSTM4Q03013 218 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CBLBQ13191 982 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 DNAL1Q4LDG9 190 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ATAT1Q5SQI0 421 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 SYPL2Q5VXT5 272 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 PTRHD1Q6GMV3 140 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TMEM214Q6NUQ4 689 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 LVRNQ6Q4G3 990 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TRABD2AQ86V40 505 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TSEN2Q8NCE0 465 aaKnown RBP6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CSGALNACT1Q8TDX6 532 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CKAP2Q8WWK9 683 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 NECTIN4Q96NY8 510 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ZBTB18Q99592 522 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TRIM15Q9C019 465 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 FAM192AQ9GZU8 254 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CCDC134Q9H6E4 229 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 TRIM39Q9HCM9 518 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CATSPERZQ9NTU4 200 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 OBP2AQ9NY56 170 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 ZNF212Q9UDV6 495 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 CRLS1Q9UJA2 301 aa6.03□□□□□ -1.44
SEC22A-201ENST00000309934 GNPTGQ9UJJ9 305 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms