RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SGCGQ13326 291 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 SEMA5AQ13591 1074 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 DHX34Q14147 1143 aaKnown RBP17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 PCSK7Q16549 785 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 TMEM259Q4ZIN3 620 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 ZSWIM9Q86XI8 627 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 LPCAT1Q8NF37 534 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 IPMKQ8NFU5 416 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 MRGPRX2Q96LB1 330 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 C6orf106Q9H6K1 298 aaPredicted RBP17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 MAGEE1Q9HCI5 957 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 EIF2B3Q9NR50 452 aaKnown RBP17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 RAB6BQ9NRW1 208 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 SMARCAL1Q9NZC9 954 aa17.98■□□□□ 0.47
SSSCA1-201ENST00000309328 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 A0A1W2PQU0 124 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 PRR5-ARHGAP8B1AHC4 643 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 ZNF500O60304 480 aaPredicted RBP17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 TM7SF2O76062 418 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 FSBPO95073 299 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 KRT14P02533 472 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 LMNAP02545 664 aaKnown RBP17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 PDHA1P08559 390 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 ELFN1P0C7U0 828 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 LMAN1P49257 510 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 DHPSP49366 369 aaPredicted RBP17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 SRSF5Q13243 272 aaKnown RBP17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 AGERQ15109 404 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 PPP1R7Q15435 360 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 SLC1A5Q15758 541 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 TTC27Q6P3X3 843 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 CYP2U1Q7Z449 544 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 MAATS1Q7Z4T9 603 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 TMEFF1Q8IYR6 380 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 FRMD1Q8N878 549 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 DENND6BQ8NEG7 585 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 SPATA4Q8NEY3 305 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 CEP76Q8TAP6 659 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 SKA1Q96BD8 255 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 BIRC7Q96CA5 298 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 TBL1YQ9BQ87 522 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 CDH19Q9H159 772 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 ARNT2Q9HBZ2 717 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 RAD18Q9NS91 495 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 UBP1Q9NZI7 540 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 B4GALT6Q9UBX8 382 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 GMEB2Q9UKD1 530 aa17.97■□□□□ 0.47
SSSCA1-201ENST00000309328 A0A1W2PPC4 97 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 RGSL1A5PLK6 1076 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 PDE2AO00408 941 aaPredicted RBP17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 SUN1O94901 812 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 METTL18O95568 372 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 RETP07949 1114 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 RPL22P35268 128 aaKnown RBP17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 ADRA1AP35348 466 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 SARNPP82979 210 aaKnown RBP17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 CREB5Q02930 508 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 IHHQ14623 411 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 QPCTQ16769 361 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 ZNF284Q2VY69 593 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 ARMC3Q5W041 872 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 KCTD11Q693B1 232 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 RANBP10Q6VN20 620 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 SYT12Q8IV01 421 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 LENG8Q96PV6 779 aaPredicted RBP17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 C19orf43Q9BQ61 176 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 C1QTNF2Q9BXJ5 285 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 SLC17A9Q9BYT1 436 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 DDX47Q9H0S4 455 aaKnown RBP17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 ETNK1Q9HBU6 452 aa17.96■□□□□ 0.47
SSSCA1-201ENST00000309328 PRR23AA6NEV1 266 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 PRAMEF26H0Y7S4 382 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 SMAPO00193 183 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 TOR1BO14657 336 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 SPINT1O43278 529 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 FOXD2O60548 495 aaPredicted RBP17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 LRP3O75074 770 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 HEXIM1O94992 359 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 EPN2O95208 641 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 IGHV4-34P06331 123 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 HNRNPA2B1P22626 353 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 AKT2P31751 481 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 HNF1BP35680 557 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 LIG3P49916 1009 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 BASP1P80723 227 aaKnown RBP17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 PDE1BQ01064 536 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 DR1Q01658 176 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 OVGP1Q12889 678 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 LAMB3Q13751 1172 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 PEAR1Q5VY43 1037 aaPredicted RBP17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 ZDHHC20Q5W0Z9 365 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 PCGF5Q86SE9 256 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 SLC41A1Q8IVJ1 513 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 RGL4Q8IZJ4 473 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 SNX19Q92543 992 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 GORASP1Q9BQQ3 440 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 FICDQ9BVA6 458 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 NEU2Q9Y3R4 380 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 MRFAP1Q9Y605 127 aa17.95■□□□□ 0.46
SSSCA1-201ENST00000309328 NPIPB15A6NHN6 443 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms