RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 AP1S1P61966 158 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ECT2LQ008S8 904 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 GABPB1Q06547 395 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 PTPRRQ15256 657 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 HSP90AA5PQ58FG0 334 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 RALGPS1Q5JS13 557 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 TSTD2Q5T7W7 516 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 TTC19Q6DKK2 380 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ZNF449Q6P9G9 518 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 KCNMB4Q86W47 210 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 CAMK1DQ8IU85 385 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SMRP1Q8NCR6 262 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 LPCAT1Q8NF37 534 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 OR2AP1Q8NGE2 309 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 OR13J1Q8NGT2 312 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 MDM1Q8TC05 714 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 BLOC1S5Q8TDH9 187 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 CYB5D2Q8WUJ1 264 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 CHFRQ96EP1 664 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 MYO19Q96H55 970 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 RIPOR3Q96MK2 946 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 AGAP2Q99490 1192 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 RPP25Q9BUL9 199 aaKnown RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 C20orf96Q9NUD7 363 aaPredicted RBP7.01□□□□□ -1.29
PTCD2-201ENST00000308077 GGT7Q9UJ14 662 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SLC25A13Q9UJS0 675 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 ERVW-1Q9UQF0 538 aa7.01□□□□□ -1.29
PTCD2-201ENST00000308077 SCN8AQ9UQD0 1980 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 PRRT4C9JH25 899 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 CCL22O00626 93 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 AURKAO14965 403 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 HTRA2O43464 458 aaPredicted RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 BUD23O43709 281 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 IGSF6O95976 241 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 KRT15P19012 456 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 POLR2EP19388 210 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 IGFBP4P22692 258 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 SLC8A1P32418 973 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 MTHFRP42898 656 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 ARSDP51689 593 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 SULT2A1Q06520 285 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 NAB1Q13506 487 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 BMPR2Q13873 1038 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 MPP2Q14168 576 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 PTPRCAPQ14761 206 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 PDGFRLQ15198 375 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 DLG2Q15700 870 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 CNGA3Q16281 694 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 QPCTQ16769 361 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 PTPRNQ16849 979 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 TEDDM1Q5T9Z0 273 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 KIAA0930Q6ICG6 404 aaPredicted RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 PACS1Q6VY07 963 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 METTL3Q86U44 580 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 SFTPA1Q8IWL2 248 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 C4orf33Q8N1A6 199 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 MICALL1Q8N3F8 863 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 PHTF2Q8N3S3 785 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 MDGA1Q8NFP4 955 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 TTC8Q8TAM2 541 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 FRS2Q8WU20 508 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 PDCD6IPQ8WUM4 868 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 NXPE3Q969Y0 559 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 ISG20Q96AZ6 181 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 ELSPBP1Q96BH3 223 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 SERAC1Q96JX3 654 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 SELENOSQ9BQE4 189 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 MCMBPQ9BTE3 642 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 CEP44Q9C0F1 390 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 TRABDQ9H4I3 376 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 IARS2Q9NSE4 1012 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 THG1LQ9NWX6 298 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 GTSE1Q9NYZ3 720 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 ZKSCAN7Q9P0L1 754 aaPredicted RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 ZFATQ9P243 1243 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 SLC27A6Q9Y2P4 619 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 ACTL7BQ9Y614 415 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 ARL5AQ9Y689 179 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 RIF1Q5UIP0 2472 aaKnown RBP7□□□□□ -1.29
PTCD2-201ENST00000308077 TICRRQ7Z2Z1 1910 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 XIRP2A4UGR9 3374 aa7□□□□□ -1.29
PTCD2-201ENST00000308077 A0A0U1RQS6 177 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 IQANK1A0A1B0GTG1 560 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 TTC34A8MYJ7 566 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 ANKRD66B4E2M5 251 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 TRIM49D1C9J1S8 452 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 MAP3K13O43283 966 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 VAPBO95292 243 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 PGLSO95336 258 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 PAPSS2O95340 614 aaPredicted RBP6.99□□□□□ -1.29
PTCD2-201ENST00000308077 GSRP00390 522 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 PSMC3P17980 439 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 OPRD1P41143 372 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 SNRPD1P62314 119 aaKnown RBP6.99□□□□□ -1.29
PTCD2-201ENST00000308077 ACVR1Q04771 509 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 KDSRQ06136 332 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 NR1H3Q13133 447 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 RUNX3Q13761 415 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 ARMC3Q5W041 872 aa6.99□□□□□ -1.29
PTCD2-201ENST00000308077 PDPK2PQ6A1A2 396 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms