RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ADRA1BP35368 520 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 TAF6P49848 677 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 SPANXN3Q5MJ09 141 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 FBXO46Q6PJ61 603 aaPredicted RBP14.65□□□□□ -0.06
PTPN9-201ENST00000306726 ANKRD52Q8NB46 1076 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 TNIP3Q96KP6 325 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 PPM1MQ96MI6 270 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 BCO2Q9BYV7 579 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 DNAJC28Q9NX36 388 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 HACD3Q9P035 362 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 OAZ3Q9UMX2 235 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 GSTA4O15217 222 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 ZNF182P17025 639 aaPredicted RBP14.65□□□□□ -0.06
PTPN9-201ENST00000306726 GRIK1P39086 918 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 SLC1A2P43004 574 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 CDH17Q12864 832 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 TARBP2Q15633 366 aaKnown RBP14.65□□□□□ -0.06
PTPN9-201ENST00000306726 FSCN1Q16658 493 aaKnown RBP14.65□□□□□ -0.06
PTPN9-201ENST00000306726 ZFAND2BQ8WV99 257 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 WNT8BQ93098 351 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 ACOX2Q99424 681 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 C6orf203Q9P0P8 240 aaPredicted RBP14.65□□□□□ -0.06
PTPN9-201ENST00000306726 PNMA8BQ9ULN7 279 aaPredicted RBP14.65□□□□□ -0.06
PTPN9-201ENST00000306726 A0A1W2PQ67 120 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 TSPAN1O60635 241 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 INHAP05111 366 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 CYP4B1P13584 511 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 HGFP14210 728 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 CNTFP26441 200 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 IST1P53990 364 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 LAPTM5Q13571 262 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 NAPEPLDQ6IQ20 393 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 HEATR4Q86WZ0 1026 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 HDAC10Q969S8 669 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 DTNBP1Q96EV8 351 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 NSUN5Q96P11 429 aaKnown RBP14.65□□□□□ -0.06
PTPN9-201ENST00000306726 CDK15Q96Q40 435 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 MIR1-1HGQ9H1L0 117 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 RERGLQ9H628 205 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 ASB7Q9H672 318 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 LTB4R2Q9NPC1 389 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 FETUBQ9UGM5 382 aa14.65□□□□□ -0.06
PTPN9-201ENST00000306726 SOCS2O14508 198 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 EI24O14681 340 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 GUCA1CO95843 209 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 TPSB2P20231 275 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 CD86P42081 329 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 MAGEA10P43363 369 aaPredicted RBP14.64□□□□□ -0.07
PTPN9-201ENST00000306726 CD151P48509 253 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 NR2C2P49116 596 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 TPSAB1Q15661 275 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 REP15Q6BDI9 236 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 GPRIN1Q7Z2K8 1008 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 PTGR2Q8N8N7 351 aaPredicted RBP14.64□□□□□ -0.07
PTPN9-201ENST00000306726 FIG4Q92562 907 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 MTFMTQ96DP5 389 aaKnown RBP14.64□□□□□ -0.07
PTPN9-201ENST00000306726 IFT43Q96FT9 208 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 PRICKLE1Q96MT3 831 aaPredicted RBP14.64□□□□□ -0.07
PTPN9-201ENST00000306726 OXSMQ9NWU1 459 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 ABI2Q9NYB9 513 aaPredicted RBP14.64□□□□□ -0.07
PTPN9-201ENST00000306726 ZMYM5Q9UJ78 669 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 NME7Q9Y5B8 376 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 MCM3APO60318 1980 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 MATN2O00339 956 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 TRIM38O00635 465 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 TMCO5AQ8N6Q1 288 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 BPIFA1Q9NP55 256 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 GSRP00390 522 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 SNRPB2P08579 225 aaKnown RBP14.64□□□□□ -0.07
PTPN9-201ENST00000306726 CDH5P33151 784 aaPredicted RBP14.64□□□□□ -0.07
PTPN9-201ENST00000306726 CA8P35219 290 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 RAB10P61026 200 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 DPYSL2Q16555 572 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 CLHC1Q8NHS4 586 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 TNFRSF12AQ9NP84 129 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 HPS4Q9NQG7 708 aa14.64□□□□□ -0.07
PTPN9-201ENST00000306726 TTC3P53804 2025 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 KANSL1LA0AUZ9 987 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 GRID2O43424 1007 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PIGRP01833 764 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 OCM2P0CE71 109 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 OCMP0CE72 109 aaPredicted RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 BRCC3P46736 316 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 EIF2B2P49770 351 aaKnown RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 SOX4Q06945 474 aaPredicted RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 BTBD8Q5XKL5 378 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PATL1Q86TB9 770 aaKnown RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 ZNF513Q8N8E2 541 aaPredicted RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 THUMPD3Q9BV44 507 aaKnown RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 MRPS26Q9BYN8 205 aaKnown RBP14.63□□□□□ -0.07
PTPN9-201ENST00000306726 TBC1D23Q9NUY8 699 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 MID2Q9UJV3 735 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 PTCH2Q9Y6C5 1203 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 SMIM28A0A1B0GU29 152 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 MYO1GB0I1T2 1018 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 FAM189A1O60320 539 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 NOBOXO60393 691 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 GJB3O75712 270 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 F2P00734 622 aa14.63□□□□□ -0.07
PTPN9-201ENST00000306726 GALNT3Q14435 633 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms