RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TRMT61BQ9BVS5 477 aaKnown RBP13.05□□□□□ -0.32
CCDC7-202ENST00000302316 ELOVL2Q9NXB9 296 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 GGT7Q9UJ14 662 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 CD207Q9UJ71 328 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
CCDC7-202ENST00000302316 C2orf81A6NN90 581 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 PRRT4C9JH25 899 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 H3BQ06 376 aaPredicted RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 AURKAO14965 403 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ITGA2BP08514 1039 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 CTPS1P17812 591 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 GJA4P35212 333 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ABL2P42684 1182 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ARSDP51689 593 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 RPL26P61254 145 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 GNGT1P63211 74 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 TAF1AQ15573 450 aaPredicted RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 PTPRNQ16849 979 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ZNF470Q6ECI4 717 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 OTUD6BQ8N6M0 293 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 MDGA1Q8NFP4 955 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 OR13C4Q8NGS5 318 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 OR2A12Q8NGT7 310 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 OR6P1Q8NGX9 317 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 MGARPQ8TDB4 240 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 PIH1D2Q8WWB5 315 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 HDAC10Q969S8 669 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 NXPE3Q969Y0 559 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ATXN7L3BQ96GX2 97 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 RPP25Q9BUL9 199 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 RPL26L1Q9UNX3 145 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 SMG5Q9UPR3 1016 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 HMX2A2RU54 273 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 FAM47DPA6NHR8 397 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 SLC7A4O43246 635 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 RPP40O75818 363 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 POP4O95707 220 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 PYGBP11216 843 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 BMP1P13497 986 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 SPRP35270 261 aaPredicted RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 SLC1A2P43004 574 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ZNF140P52738 457 aaPredicted RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 LIMK2P53671 638 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 CSE1LP55060 971 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ACVR1Q04771 509 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 PTPRCAPQ14761 206 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 EIF4HQ15056 248 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 NAIF1Q69YI7 327 aaPredicted RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 NEPROQ6NW34 567 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 DENND6AQ8IWF6 608 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 TERB1Q8NA31 727 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 CHST14Q8NCH0 376 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 GABPB2Q8TAK5 448 aaPredicted RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 CALML6Q8TD86 181 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 FRS2Q8WU20 508 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 ALKBH8Q96BT7 664 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 CPEB1Q9BZB8 566 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 MFSD1Q9H3U5 465 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 SSU72Q9NP77 194 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
CCDC7-202ENST00000302316 NKIRAS1Q9NYS0 192 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 HACD3Q9P035 362 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 RIMKLBQ9ULI2 386 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 PLA2G4CQ9UP65 541 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 NUMBLQ9Y6R0 609 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 BPTFQ12830 3046 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 KIAA1549LQ6ZVL6 1849 aa13.04□□□□□ -0.32
CCDC7-202ENST00000302316 SOX1O00570 391 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 PRPF4O43172 522 aaKnown RBP eCLIP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 ALPIP09923 528 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 OPRD1P41143 372 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 ABCG1P45844 678 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 MPP1Q00013 466 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 MLLT1Q03111 559 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 GABPB1Q06547 395 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 CTBP1Q13363 440 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 GRM3Q14832 879 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 PTPRRQ15256 657 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 UGP2Q16851 508 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 PTAR1Q7Z6K3 402 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 CNPY4Q8N129 248 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 GRIN3AQ8TCU5 1115 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 SUSD6Q92537 303 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 TBATAQ96M53 351 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 SUV39H2Q9H5I1 410 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 NLE1Q9NVX2 485 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 POLR3BQ9NW08 1133 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 EPS15L1Q9UBC2 864 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 ZNF711Q9Y462 761 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 A0A0J9YYE9 177 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.03□□□□□ -0.32
CCDC7-202ENST00000302316 WASH3PC4AMC7 463 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 TIMM44O43615 452 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 TYROBPO43914 113 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 SIN3BO75182 1162 aa13.03□□□□□ -0.32
CCDC7-202ENST00000302316 RFPL1O75677 317 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms