RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FADS2O95864 444 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF24P17028 368 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ATP5F1P24539 256 aaPredicted RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GSTT1P30711 240 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LPCAT4Q643R3 524 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF655Q8N720 491 aaPredicted RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ART4Q93070 314 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZNF354BQ96LW1 612 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OR52E6Q96RD3 313 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CNOT6Q9ULM6 557 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 C9JVG2 144 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ITGA1P56199 1179 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TNK2Q07912 1038 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MZT2AQ6P582 158 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RHBDF2Q6PJF5 856 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 B3GNT6Q6ZMB0 384 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ATP6V1C2Q8NEY4 427 aa13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 IMP3Q9NV31 184 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AGO1Q9UL18 857 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SAMHD1Q9Y3Z3 626 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLC28A1O00337 649 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OR5F1O95221 314 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SLC25A14O95258 325 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MPSTP25325 297 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OAZ1P54368 228 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TAS2R41P59536 307 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SCRN3Q0VDG4 424 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RALGPS2Q86X27 583 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 EEF1AKMT1Q8WVE0 214 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PGM2Q96G03 612 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 AARSD1Q9BTE6 412 aaKnown RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RPRD1BQ9NQG5 326 aaKnown RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LEF1Q9UJU2 399 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 NRCAMQ92823 1304 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LGR5O75473 907 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ADGRG2Q8IZP9 1017 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 DCBLD1Q8N8Z6 715 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 OR4L1Q8NH43 312 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 STARD8Q92502 1023 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MMADHCQ9H3L0 296 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ZMYM2Q9UBW7 1377 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 H3BMM5 538 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TEX28O15482 410 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SNX3O60493 162 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TTPAP49638 278 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CLCN5P51795 746 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FOLH1Q04609 750 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 QPCTQ16769 361 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GPR142Q7Z601 462 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FAM129CQ86XR2 697 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GPC2Q8N158 579 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PRELID2Q8N945 189 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MARCH7Q9H992 704 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ASF1AQ9Y294 204 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PCDHB9Q9Y5E1 797 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 BTN3A3O00478 584 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TIPRLO75663 272 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SEC24AO95486 1093 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PCCBP05166 539 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CCNA2P20248 432 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PACS1Q6VY07 963 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MLYCDO95822 493 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 UGT2B15P54855 530 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CIR1Q86X95 450 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CLPTM1LQ96KA5 538 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 WDR55Q9H6Y2 383 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PCDHGC5Q9Y5F6 944 aa13.61□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CCDC182A6NF36 153 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CCL22O00626 93 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 WNT7AO00755 349 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TKTP29401 623 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LIPMQ5VYY2 423 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 EEF1DP3Q658K8 133 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 LINGO4Q6UY18 593 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CAMK1DQ8IU85 385 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RIOX2Q8IUF8 465 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ERVK-5Q9HDB9 667 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 SNX10Q9Y5X0 201 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RGSL1A5PLK6 1076 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TRIM38O00635 465 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RFXANKO14593 260 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ADCY6O43306 1168 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 MAFO75444 373 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RECQL5O94762 991 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RCVRNP35243 200 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 PREPLQ4J6C6 727 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 BROXQ5VW32 411 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 IRGCQ6NXR0 463 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 FAM71AQ8IYT1 594 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ENOPH1Q9UHY7 261 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 RPS6KA6Q9UK32 745 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GUCY1B2O75343 617 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 ITGAVP06756 1048 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CYP3A4P08684 503 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 CASP7P55210 303 aa13.6□□□□□ -0.23
CHRFAM7A-201ENST00000299847 GTF2BQ00403 316 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms