RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 LINC00523Q86TU6 105 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 ZNF598Q86UK7 904 aaKnown RBP10.16□□□□□ -0.78
FOXN4-201ENST00000299162 COLGALT2Q8IYK4 626 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 SREK1Q8WXA9 508 aaKnown RBP10.16□□□□□ -0.78
FOXN4-201ENST00000299162 AUTS2Q8WXX7 1259 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 RMDN1Q96DB5 314 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 PGAP3Q96FM1 320 aaPredicted RBP10.16□□□□□ -0.78
FOXN4-201ENST00000299162 NOL6Q9H6R4 1146 aaKnown RBP10.16□□□□□ -0.78
FOXN4-201ENST00000299162 GPBP1L1Q9HC44 474 aaPredicted RBP10.16□□□□□ -0.78
FOXN4-201ENST00000299162 LZTS1Q9Y250 596 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 C15orf38-AP3S2A0A0A6YYH1 394 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 KLF11O14901 512 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 ZBTB14O43829 449 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 RAMP2O60895 175 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 CCDC166P0CW27 439 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 ENO3P13929 434 aaPredicted RBP10.16□□□□□ -0.78
FOXN4-201ENST00000299162 ARNTP27540 789 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 SLC11A1P49279 550 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 NUDT2P50583 147 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 AIF1P55008 147 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 GEMP55040 296 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 PKNOX1P55347 436 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 LSAMPQ13449 338 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 SH2D4BQ5SQS7 431 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 DENND5AQ6IQ26 1287 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 LAYNQ6UX15 382 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 TIFABQ6ZNK6 161 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 ARPINQ7Z6K5 226 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 HPS6Q86YV9 775 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 TMPRSS6Q8IU80 811 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 DENND1CQ8IV53 801 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 APLFQ8IW19 511 aaPredicted RBP10.16□□□□□ -0.78
FOXN4-201ENST00000299162 IRGQQ8WZA9 623 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 TBATAQ96M53 351 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 PKMYT1Q99640 499 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 DCUN1D5Q9BTE7 237 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 ZDHHC2Q9UIJ5 367 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 PCDHB8Q9UN66 801 aa10.16□□□□□ -0.78
FOXN4-201ENST00000299162 NCF1BA6NI72 391 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 NCF1CA8MVU1 366 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 A8MX80 341 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 CBX4O00257 560 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 CYP11A1P05108 521 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 SERPINA6P08185 405 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 NCF1P14598 390 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 OR1D2P34982 312 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 HCAR3P49019 387 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 COPAP53621 1224 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 IHHQ14623 411 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 FRMD7Q6ZUT3 714 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 OR13C4Q8NGS5 318 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 OR6K2Q8NGY2 324 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 ACMSDQ8TDX5 336 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 HEXDCQ8WVB3 486 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 VAT1Q99536 393 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 ZYG11BQ9C0D3 744 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 OSBPL2Q9H1P3 480 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 RHOJQ9H4E5 214 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 POMKQ9H5K3 350 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 ALG9Q9H6U8 611 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 GPAMQ9HCL2 828 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 BPIFA1Q9NP55 256 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 SARS2Q9NP81 518 aaKnown RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 TCF7L2Q9NQB0 619 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 MARCH4Q9P2E8 410 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 ADAMTS6Q9UKP5 1117 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 TCAF1Q9Y4C2 921 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 GJB5O95377 273 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 KCNA5P22460 613 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 FOLH1Q04609 750 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 NFE2Q16621 373 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 BRMS1LQ5PSV4 323 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 CENPLQ8N0S6 344 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 FAM156AQ8NDB6 213 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 TMA16Q96EY4 203 aaKnown RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 LENG8Q96PV6 779 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 HAPLN3Q96S86 360 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 CCDC106Q9BWC9 280 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 ILKAPQ9H0C8 392 aaPredicted RBP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 TRPC7Q9HCX4 862 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 NEU3Q9UQ49 428 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 FAM50BQ9Y247 325 aa10.15□□□□□ -0.78
FOXN4-201ENST00000299162 SF3B1O75533 1304 aaKnown RBP eCLIP10.15□□□□□ -0.78
FOXN4-201ENST00000299162 HTR3EA5X5Y0 456 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 ERI2A8K979 691 aaKnown RBP10.15□□□□□ -0.79
FOXN4-201ENST00000299162 CAPN14A8MX76 684 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 GPR39O43194 453 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 DLX3O60479 287 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 NBNO60934 754 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 SEMG2Q02383 582 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 PDCD11Q14690 1871 aaKnown RBP10.15□□□□□ -0.79
FOXN4-201ENST00000299162 CCDC153Q494R4 210 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 GPR158Q5T848 1215 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 LRRC8EQ6NSJ5 796 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 SLC2A7Q6PXP3 512 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 LRRC8DQ7L1W4 858 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 DHDDSQ86SQ9 333 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 SNX32Q86XE0 403 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 TMCO5AQ8N6Q1 288 aa10.15□□□□□ -0.79
FOXN4-201ENST00000299162 DCBLD1Q8N8Z6 715 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms