RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NEK3P51956 506 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 DNAJC9Q8WXX5 260 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 CLP1Q92989 425 aaKnown RBP17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 SATB2Q9UPW6 733 aa17.77■□□□□ 0.43
CDC42EP3-201ENST00000295324 BCLAF3A2AJT9 711 aaKnown RBP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 YJEFN3A6XGL0 299 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 E7ENQ6 273 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 FCHO1O14526 889 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 MATN3O15232 486 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 TBL3Q12788 808 aaKnown RBP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 DEFB107AQ8IZN7 70 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 RDH11Q8TC12 318 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 GFM2Q969S9 779 aaKnown RBP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 TNKS2Q9H2K2 1166 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 PIF1Q9H611 641 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 FBXW11Q9UKB1 542 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 CCDC189A1A4V9 331 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 ALOX15BO15296 676 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 OR10H2O60403 315 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 NOL4O94818 638 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 KRT8P05787 483 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 HNRNPDQ14103 355 aaKnown RBP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 DUPD1Q68J44 220 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 OTOP3Q7RTS5 596 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 STYXQ8WUJ0 223 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 KCTD4Q8WVF5 259 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 CCDC167Q9P0B6 97 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 KCNE1P15382 129 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 CLK1P49759 484 aaKnown RBP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 CCR3P51677 355 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 ACTRT2Q8TDY3 377 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 PXYLP1Q8TE99 480 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 OXNAD1Q96HP4 312 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 ACE2Q9BYF1 805 aaPredicted RBP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 RNF39Q9H2S5 420 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 TLR9Q9NR96 1032 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 PTPN4P29074 926 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 JAM2P57087 298 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 TRAF2Q12933 501 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 TOMM20Q15388 145 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 RHBDF2Q6PJF5 856 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 GPRIN3Q6ZVF9 776 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 GALNT13Q8IUC8 556 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 SLC22A17Q8WUG5 538 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 QKIQ96PU8 341 aaKnown RBP eCLIP17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 RHOJQ9H4E5 214 aa17.76■□□□□ 0.43
CDC42EP3-201ENST00000295324 C10orf71Q711Q0 1435 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 H3BM21 787 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 PKMP14618 531 aaKnown RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 CCR4P51679 360 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 SEC13P55735 322 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 CERCAMQ5T4B2 595 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 SRLQ86TD4 932 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 OR52K2Q8NGK3 314 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 MINDY3Q9H8M7 445 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 RXFP1Q9HBX9 757 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 INSIG1O15503 277 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 TNFRSF8P28908 595 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 MRPL28Q13084 256 aaKnown RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 DEPDC1Q5TB30 811 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 TTC33Q6PID6 262 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 C17orf64Q86WR6 236 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 CYP4Z2PQ8N1L4 340 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 PROX1Q92786 737 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 TMEM216Q9P0N5 145 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 SLC28A1O00337 649 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 IYDQ6PHW0 289 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 CRYBG2Q8N1P7 616 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 CCDC185Q8N715 623 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 GBA3Q9H227 469 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 RABGEF1Q9UJ41 708 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 COPZ1P61923 177 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 PTP4A2Q12974 167 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 ALFQ53S48 1182 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 INTS11Q5TA45 600 aaKnown RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 HGSNATQ68CP4 663 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 FAM43BQ6ZT52 329 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 TMPRSS6Q8IU80 811 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 GTF2A1LQ9UNN4 478 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 PIPSLA2A3N6 862 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 DEAF1O75398 565 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 WDR47O94967 919 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 HNF4AP41235 474 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 CAPN13Q6MZZ7 669 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 UBE2R2Q712K3 238 aaPredicted RBP17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 TMEM192Q8IY95 271 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 ZNF232Q9UNY5 417 aa17.75■□□□□ 0.43
CDC42EP3-201ENST00000295324 M0R3G1 203 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 IRAK2O43187 625 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 S100A5P33763 92 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 VHLP40337 213 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 CLK3P49761 638 aaKnown RBP17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 CACNG1Q06432 222 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 SPIRE1Q08AE8 756 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 ADCK1Q86TW2 530 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 MICU2Q8IYU8 434 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 PIWIL2Q8TC59 973 aaKnown RBP17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 B3GALT6Q96L58 329 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms