RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 HSPA1BP0DMV9 641 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 ITPKAP23677 461 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ACVRL1P37023 503 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 RAB27AP51159 221 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 KCNQ1P51787 676 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 IL5RAQ01344 420 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 MAPK11Q15759 364 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 INTS6LQ5JSJ4 861 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 TEDDM1Q5T9Z0 273 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HECTD2Q5U5R9 776 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CACHD1Q5VU97 1274 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC26A9Q7LBE3 791 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ZC3H3Q8IXZ2 948 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 DSELQ8IZU8 1212 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SIDT2Q8NBJ9 832 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 OR10Q1Q8NGQ4 319 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 OR4L1Q8NH43 312 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HEXDCQ8WVB3 486 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ZNF570Q96NI8 536 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CIB1Q99828 191 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 MLPHQ9BV36 600 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 DPY30Q9C005 99 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SAR1AQ9NR31 198 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 DNAJB4Q9UDY4 337 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ARFGEF1Q9Y6D6 1849 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 MAST2Q6P0Q8 1798 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SF3B1O75533 1304 aaKnown RBP eCLIP4.8□□□□□ -1.644e-6■■■■■ 79.1
UBR1-201ENST00000290650 EVPLLA8MZ36 301 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ONECUT3O60422 494 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 MAN1A2O60476 641 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 TYMPP19971 482 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 MSH3P20585 1137 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC7A2P52569 658 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 IL2P60568 153 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CYP4F2P78329 520 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CYP4F8P98187 520 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CYP4F3Q08477 520 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CCDC157Q569K6 752 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 UGT3A1Q6NUS8 523 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 DCLRE1AQ6PJP8 1040 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 NECAB2Q7Z6G3 386 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SPPL2CQ8IUH8 684 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 DBF4BQ8NFT6 615 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC35B2Q8TB61 432 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ZNF778Q96MU6 729 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CYLDQ9NQC7 956 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 FBXW11Q9UKB1 542 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 AGO1Q9UL18 857 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 XIRP1Q702N8 1843 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 H2AFYO75367 372 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 MTX2O75431 263 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 AP2A1O95782 977 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GOT2P00505 430 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 SERPINA6P08185 405 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 TUSC3Q13454 348 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 RIPK1Q13546 671 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 KRT72Q14CN4 511 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PAOXQ6QHF9 649 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CDHR3Q6ZTQ4 885 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ADCK1Q86TW2 530 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 FSTL5Q8N475 847 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 PQLC3Q8N755 202 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ARL14EPQ8N8R7 260 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 ATG16L2Q8NAA4 619 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 UTP15Q8TED0 518 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 WDR60Q8WVS4 1066 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 C10orf82Q8WW14 230 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GPR21Q99679 349 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 NMUR1Q9HB89 426 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 KANSL3Q9P2N6 904 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SEPT3Q9UH03 358 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ADAM28Q9UKQ2 775 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PADI4Q9UM07 663 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC12A4Q9UP95 1085 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 POLR3HQ9Y535 204 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 MGAT4DA6NG13 374 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 NRP2O60462 931 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 RTN3O95197 1032 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 CYP3A5P20815 502 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PEX2P28328 305 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SKIV2L2P42285 1042 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 HADHBP55084 474 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 CHRNB3Q05901 458 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC10A7Q0GE19 358 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PLCL1Q15111 1095 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SIX1Q15475 284 aaPredicted RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 CRY1Q16526 586 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ANKS6Q68DC2 871 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 TAPT1Q6NXT6 567 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CUZD1Q86UP6 607 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ZNF280BQ86YH2 543 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC22A9Q8IVM8 553 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 DPF3Q92784 378 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 OR52B2Q96RD2 323 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 RBBP8Q99708 897 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 C16orf70Q9BSU1 422 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 WRAP53Q9BUR4 548 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 PAPOLBQ9NRJ5 636 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 MIOSQ9NXC5 875 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms