RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CCNB1P14635 433 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PECAM1P16284 738 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 MAT2AP31153 395 aaKnown RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 MMP12P39900 470 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 NOP2P46087 812 aaKnown RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 NR2C2P49116 596 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 SCNN1BP51168 640 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 GSDMDP57764 484 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PFN3P60673 137 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 MAXP61244 160 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 FAM193AP78312 1265 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 CCDC15Q0P6D6 951 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 WASHC5Q12768 1159 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 OVGP1Q12889 678 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 TRAF2Q12933 501 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 ZBTB17Q13105 803 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PRKD1Q15139 912 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PTPRRQ15256 657 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 AASDHQ4L235 1098 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 TPRG1LQ5T0D9 272 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 FBXL19Q6PCT2 694 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 BRAT1Q6PJG6 821 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 LIPIQ6XZB0 460 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 BBS12Q6ZW61 710 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 RNF10Q8N5U6 811 aaKnown RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 TP53I13Q8NBR0 393 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 HES6Q96HZ4 224 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PPP1R16AQ96I34 528 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 SERAC1Q96JX3 654 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 MIR1-1HGQ9H1L0 117 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 SP110Q9HB58 689 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PCDH12Q9NPG4 1184 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PNMA8BQ9ULN7 279 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 CA5BQ9Y2D0 317 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 FNDC3AQ9Y2H6 1198 aaKnown RBP9.23□□□□□ -0.93
HMGN1-201ENST00000288344 PCDHGC4Q9Y5F7 938 aa9.23□□□□□ -0.93
HMGN1-201ENST00000288344 CHD8Q9HCK8 2581 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 GIPC1O14908 333 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 SLC31A1O15431 190 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 ARHGAP6O43182 974 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 CST8O60676 142 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 PGLSO95336 258 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 HLA-DQB2P05538 268 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 PRLRP16471 622 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 MX2P20592 715 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 HNRNPA2B1P22626 353 aaKnown RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 CES1P23141 567 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 CD68P34810 354 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 GJC1P36383 396 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 SSR1P43307 286 aaKnown RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 MMP13P45452 471 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 MAPK8P45983 427 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 RAD51Q06609 339 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 KLF1Q13351 362 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 WSCD2Q2TBF2 565 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 SETMARQ53H47 684 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 TFDP3Q5H9I0 405 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 LRRC73Q5JTD7 316 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 AADACL2Q6P093 401 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 KDM7AQ6ZMT4 941 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 ERMP1Q7Z2K6 904 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 GLRX5Q86SX6 157 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 DAAM2Q86T65 1068 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 KLHDC8BQ8IXV7 354 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 ATPAF2Q8N5M1 289 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 KIAA1524Q8TCG1 905 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 SAP25Q8TEE9 199 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 KLK6Q92876 244 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 SCRN2Q96FV2 425 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 PDLIM2Q96JY6 352 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 SMIM14Q96QK8 99 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 TRIB3Q96RU7 358 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 CINPQ9BW66 212 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 BRD8Q9H0E9 1235 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 GAREM1Q9H706 876 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 ATP13A3Q9H7F0 1226 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 GRPEL1Q9HAV7 217 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 USP29Q9HBJ7 922 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 MBNL1Q9NR56 388 aaKnown RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 RBM22Q9NW64 420 aaKnown RBP eCLIP9.22□□□□□ -0.933e-6■■□□□ 13.5
HMGN1-201ENST00000288344 TOR4AQ9NXH8 423 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 KLF15Q9UIH9 416 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 CDV3Q9UKY7 258 aaKnown RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 NOVA2Q9UNW9 492 aaKnown RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 CAPN6Q9Y6Q1 641 aa9.22□□□□□ -0.93
HMGN1-201ENST00000288344 TPRP12270 2363 aaKnown RBP9.22□□□□□ -0.93
HMGN1-201ENST00000288344 TDRD6O60522 2096 aaKnown RBP9.21□□□□□ -0.93
HMGN1-201ENST00000288344 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.21□□□□□ -0.94
HMGN1-201ENST00000288344 CCDC66A2RUB6 948 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 ESPNB1AK53 854 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 KCNK1O00180 336 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 APOL1O14791 398 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 SPOPO43791 374 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 MMP20O60882 483 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 KCNK5O95279 499 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 JCHAINP01591 159 aa9.21□□□□□ -0.94
HMGN1-201ENST00000288344 KRT1P04264 644 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms