RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 DKK3Q9UBP4 350 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 SARDHQ9UL12 918 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 PPIL1Q9Y3C6 166 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 RPS6KL1Q9Y6S9 549 aa19■□□□□ 0.63
PDLIM3-202ENST00000284770 TSPAN11A1L157 253 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 SYNCRIPO60506 623 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 RNF40O75150 1001 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 USP1O94782 785 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 OAS2P29728 719 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 PHBP35232 272 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 LAMB3Q13751 1172 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 SEPT6Q14141 434 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 STAT4Q14765 748 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 KRT71Q3SY84 523 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 UBALD2Q8IYN6 164 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 NDUFAF2Q8N183 169 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 GOLGA6L1Q8N7Z2 621 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 GSDMBQ8TAX9 411 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 EPS8L3Q8TE67 593 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 ROPN1BQ9BZX4 212 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 ROPN1Q9HAT0 212 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 MAGEE1Q9HCI5 957 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 HACD3Q9P035 362 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 FBXL21Q9UKT6 434 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 NDRG2Q9UN36 371 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 SPO11Q9Y5K1 396 aa18.99■□□□□ 0.63
PDLIM3-202ENST00000284770 MROH6A6NGR9 719 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 LDB2O43679 373 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 ADAM23O75077 832 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 KLF8O95600 359 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 MYZAPP0CAP1 466 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 CTPS1P17812 591 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 ABL2P42684 1182 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 CRYMQ14894 314 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 HSF5Q4G112 596 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 ANKRD20A4Q4UJ75 823 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 SPANXN3Q5MJ09 141 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 CES3Q6UWW8 571 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 NLRP9Q7RTR0 991 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 TXNDC5Q8NBS9 432 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 PIP4K2CQ8TBX8 421 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 MFSD3Q96ES6 412 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 SCRN2Q96FV2 425 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 SHDQ96IW2 340 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 ZNF778Q96MU6 729 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 SMIM14Q96QK8 99 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 SRPK1Q96SB4 655 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 RABGEF1Q9UJ41 708 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 TCRBV9S1A1TA0A576 114 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 KRBA1A5PL33 1030 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 GOLGA8KD6RF30 607 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 KPNA3O00505 521 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 CRTAMO95727 393 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 IL1BP01584 269 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 ALPIP09923 528 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 NMBRP28336 390 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 STARD6P59095 220 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 STARD3Q14849 445 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 TAF1AQ15573 450 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 UGP2Q16851 508 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 LONRF1Q17RB8 773 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 CYS1Q717R9 158 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 GLT6D1Q7Z4J2 308 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 ZNF687Q8N1G0 1237 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 MDGA1Q8NFP4 955 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 PKNOX2Q96KN3 472 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 FCRL3Q96P31 734 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 LYSMD1Q96S90 227 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 RSPH9Q9H1X1 276 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 TRABDQ9H4I3 376 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 MRPS17Q9Y2R5 130 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 FAM169AQ9Y6X4 670 aa18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 TCF20Q9UGU0 1960 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-202ENST00000284770 GOLGA6L10A6NI86 522 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 C16orf96A6NNT2 1141 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 RASGRF2O14827 1237 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 PAPSS2O95340 614 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 ITGB7P26010 798 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 HNF1BP35680 557 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 PTPRRQ15256 657 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 USP45Q70EL2 814 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 CROCCP2Q86T23 111 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 MMAAQ8IVH4 418 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 GJD3Q8N144 294 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 RPLP0P6Q8NHW5 317 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 FBF1Q8TES7 1133 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 ZNF669Q96BR6 464 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 PPP1R16AQ96I34 528 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 MCCC1Q96RQ3 725 aaPredicted RBP18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 ACSS3Q9H6R3 686 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 TREX1Q9NSU2 369 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 ARL5AQ9Y689 179 aa18.97■□□□□ 0.63
PDLIM3-202ENST00000284770 ZCWPW2A0A1B0GU75 182 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 CAPN8A6NHC0 703 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 C1QTNF3-AMACRE9PGA6 284 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 AURKAO14965 403 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 RNASEH1O60930 286 aaKnown RBP18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 ALDH1A2O94788 518 aa18.96■□□□□ 0.63
PDLIM3-202ENST00000284770 C1QAP02745 245 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms