RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 GMEB1Q9Y692 573 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 PRSS51A0A1B0GVH4 220 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 CCDC160A6NGH7 325 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 SLC38A8A6NNN8 435 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 TLR5O60602 858 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 RPL14P50914 215 aaKnown RBP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 INHBCP55103 352 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ELAVL2Q12926 359 aaKnown RBP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 MYLK3Q32MK0 819 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 LSM12Q3MHD2 195 aaKnown RBP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 FBXL22Q6P050 247 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ZFP28Q8NHY6 868 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ITFG2Q969R8 447 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 KLHL5Q96PQ7 755 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 DRC3Q9H069 523 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 ZNF385DQ9H6B1 395 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 SUDS3Q9H7L9 328 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 COPS7BQ9H9Q2 264 aaPredicted RBP18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 PACSIN3Q9UKS6 424 aa18.42■□□□□ 0.54
PDLIM3-201ENST00000284767 GOLGA8QA0A0J9YX86 632 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 TTC24A2A3L6 582 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 GOLGA8OA6NCC3 632 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 GOLGA8NF8WBI6 632 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 J3KR12 359 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 BCAS2O75934 225 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 ME2P23368 584 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 NR1H2P55055 460 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 RFTN1Q14699 578 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 PPM1LQ5SGD2 360 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 SPOUT1Q5T280 376 aaKnown RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 BHLHE22Q8NFJ8 381 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 IPMKQ8NFU5 416 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 AGAP2Q99490 1192 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 VAT1Q99536 393 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 RBM22Q9NW64 420 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 GALNT8Q9NY28 637 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 BFARQ9NZS9 450 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 APPL1Q9UKG1 709 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 SLCO1B7G3V0H7 640 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 H7C4K7 107 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 TIMM44O43615 452 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 ZNF189O75820 626 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 SEC24AO95486 1093 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 DEFB103AP81534 67 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 COG7P83436 770 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 HPCAP84074 193 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 TMEM135Q86UB9 458 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 LILRA2Q8N149 483 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 RCN3Q96D15 328 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 HMCESQ96FZ2 354 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 IGSF21Q96ID5 467 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 TSGA13Q96PP4 275 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 BEGAINQ9BUH8 593 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 WDR55Q9H6Y2 383 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 PREBQ9HCU5 417 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 PRDM5Q9NQX1 630 aaPredicted RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 VTI1BQ9UEU0 232 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 IPO11Q9UI26 975 aaKnown RBP18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 PCDHGB4Q9UN71 923 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 PCDHGB5Q9Y5G0 923 aa18.41■□□□□ 0.54
PDLIM3-201ENST00000284767 MATN3O15232 486 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 C2P06681 752 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 ATP6V1B1P15313 513 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 MPSTP25325 297 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 CSE1LP55060 971 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 MAXP61244 160 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 CEACAM7Q14002 265 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 IKBKEQ14164 716 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 TRIP4Q15650 581 aaPredicted RBP18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 AFMIDQ63HM1 303 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 KIAA1841Q6NSI8 718 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 AGR3Q8TD06 166 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 PDCD6IPQ8WUM4 868 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 AUTS2Q8WXX7 1259 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 SPATA17Q96L03 361 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 C1orf74Q96LT6 269 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 PRPF18Q99633 342 aaKnown RBP18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 CLSTN3Q9BQT9 956 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 WDR41Q9HAD4 459 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 TMEM39AQ9NV64 488 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 TBX21Q9UL17 535 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 PMPCBO75439 489 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 IRF9Q00978 393 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 PRKAA1Q13131 559 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 LIPMQ5VYY2 423 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 NADSYN1Q6IA69 706 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 ZNF354CQ86Y25 554 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 CFAP52Q8N1V2 620 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 LZTR1Q8N653 840 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 IL12RB2Q99665 862 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 PKP2Q99959 881 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 SLC2A11Q9BYW1 496 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 IL22Q9GZX6 179 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 EFCAB1Q9HAE3 211 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 GLOD4Q9HC38 313 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 MTRRQ9UBK8 725 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 DOCK4Q8N1I0 1966 aa18.4■□□□□ 0.54
PDLIM3-201ENST00000284767 ZCWPW2A0A1B0GU75 182 aa18.39■□□□□ 0.54
PDLIM3-201ENST00000284767 H0YJX3 145 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms