RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 COL6A2P12110 1019 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 SETMARQ53H47 684 aaPredicted RBP8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 C12orf56Q8IXR9 622 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 CDYL2Q8N8U2 506 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 PXMP2Q9NR77 195 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 AXIN2Q9Y2T1 843 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 A0A0G2JPF8 293 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 CARNS1A5YM72 827 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 HNRNPCL3B7ZW38 293 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 SLC30A4O14863 429 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 BCKDKO14874 412 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 SIN3BO75182 1162 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 BPGMP07738 259 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 HNRNPCL4P0DMR1 293 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 HNF4AP41235 474 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 PTPN5P54829 565 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 POTEHQ6S545 545 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 TFAP2DQ7Z6R9 452 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 SVOPLQ8N434 492 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 KCTD4Q8WVF5 259 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 CPB2Q96IY4 423 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 C7orf26Q96N11 449 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 C12orf4Q9NQ89 552 aa8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.74□□□□□ -1.01
SCUBE3-201ENST00000274938 FSCN2O14926 492 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 UGT2B17O75795 530 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ITIH1P19827 911 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 SLC6A2P23975 617 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ZNF410Q86VK4 478 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 SLITRK4Q8IW52 837 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 GJD3Q8N144 294 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 AGBL3Q8NEM8 1001 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 MTFMTQ96DP5 389 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 FAM129BQ96TA1 746 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 NECTIN3Q9NQS3 549 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 THG1LQ9NWX6 298 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 RBM7Q9Y580 266 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 PLA2R1Q13018 1463 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 INO80Q9ULG1 1556 aaPredicted RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 SHROOM2Q13796 1616 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ACKR2O00590 384 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 DHX15O43143 795 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 AVILO75366 819 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 TULP3O75386 442 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 PAX3P23760 479 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 MAMLD1Q13495 774 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ITGA7Q13683 1181 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 E2F2Q14209 437 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 SEC23AQ15436 765 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 GSTCDQ8NEC7 633 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 FCGR1BQ92637 280 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 PNMA5Q96PV4 448 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 BHLHE41Q9C0J9 482 aaPredicted RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ELL3Q9HB65 397 aaPredicted RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 PMF1-BGLAPU3KQ54 211 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 SLC25A12O75746 678 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 NR4A1P22736 598 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 EFR3AQ14156 821 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 CA9Q16790 459 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 MTX3Q5HYI7 312 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ALYREFQ86V81 257 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ZZZ3Q8IYH5 903 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 FAM98AQ8NCA5 519 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ELMO1Q92556 727 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 AGXT2Q9BYV1 514 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 FBXO6Q9NRD1 293 aaPredicted RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ZNF214Q9UL59 606 aaPredicted RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 SNAPC5O75971 98 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ZNF432O94892 652 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 GPIP06744 558 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 TGFB3P10600 412 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 GLRA2P23416 452 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 IGFBP5P24593 272 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 BNIP1Q12981 228 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 FAM205AQ6ZU69 1335 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 CNTD1Q8N815 330 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 NXNL1Q96CM4 212 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 HSFY1Q96LI6 401 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 OR52E6Q96RD3 313 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 TKTL2Q9H0I9 626 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 ARL8BQ9NVJ2 186 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 TAS2R7Q9NYW3 318 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 TBC1D24Q9ULP9 559 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 GNEQ9Y223 722 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 FAM50BQ9Y247 325 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 GATBO75879 557 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 TRUB2O95900 331 aaKnown RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 PRKAG1P54619 331 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 RALGDSQ12967 914 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 KLF10Q13118 480 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 CCNYL2Q5T2Q4 361 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 DEF8Q6ZN54 512 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 SMIM5Q71RC9 77 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 EPS8L1Q8TE68 723 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 C12orf66Q96MD2 445 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 RNF157Q96PX1 679 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 PDCD2LQ9BRP1 358 aa8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 FDXACB1Q9BRP7 624 aaPredicted RBP8.73□□□□□ -1.01
SCUBE3-201ENST00000274938 PAK6Q9NQU5 681 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms