RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 BRINP1O60477 761 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 PEX11BO96011 259 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 PRKCGP05129 697 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 TCF4P15884 667 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 TSHRP16473 764 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 TGM2P21980 687 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 ITPKBP27987 946 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 SERPINA4P29622 427 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 MMP12P39900 470 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 SCNN1BP51168 640 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 ADKP55263 362 aaKnown RBP9.79□□□□□ -0.84
VPS41-201ENST00000265745 POLR2LP62875 67 aaKnown RBP9.79□□□□□ -0.84
VPS41-201ENST00000265745 FANCCQ00597 558 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 PPARDQ03181 441 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 SLC10A7Q0GE19 358 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 C1orf61Q13536 156 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 INPP5AQ14642 412 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 IRF4Q15306 451 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 NR0B2Q15466 257 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 CDKN3Q16667 212 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 MSS51Q4VC12 460 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 CFAP58Q5T655 872 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 FAXCQ5TGI0 409 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 GUSBP11Q6P575 273 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 POLNQ7Z5Q5 900 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 LUZP1Q86V48 1076 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 SNIP1Q8TAD8 396 aaKnown RBP9.79□□□□□ -0.84
VPS41-201ENST00000265745 IFI44Q8TCB0 444 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 MAPK15Q8TD08 544 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 PSKH2Q96QS6 385 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 OCSTAMPQ9BR26 566 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 APOOQ9BUR5 198 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 LRRC61Q9BV99 259 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 CINPQ9BW66 212 aaPredicted RBP9.79□□□□□ -0.84
VPS41-201ENST00000265745 CLPBQ9H078 707 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 ATP13A3Q9H7F0 1226 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 ZWILCHQ9H900 591 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 SP110Q9HB58 689 aa9.79□□□□□ -0.84
VPS41-201ENST00000265745 APOBEC3BQ9UH17 382 aaKnown RBP9.79□□□□□ -0.84
VPS41-201ENST00000265745 SYCE3A1L190 88 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 H3BRJ5 948 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 LZTS3O60299 673 aaPredicted RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 USP12O75317 370 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 CSO75390 466 aaKnown RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 DXOO77932 396 aaKnown RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 RECQL5O94762 991 aaPredicted RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 ANXA6P08133 673 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 RARAP10276 462 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 AMPD1P23109 780 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 HTR1BP28222 390 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 ACTN2P35609 894 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 ABCG1P45844 678 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 RPIAP49247 311 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 BLKP51451 505 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 RENBPP51606 427 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 HK3P52790 923 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 UBASH3AP57075 661 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 AP1S1P61966 158 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 BCL2L1Q07817 233 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 RALGDSQ12967 914 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 PIGHQ14442 188 aaPredicted RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 LBRQ14739 615 aaKnown RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 ISXQ2M1V0 245 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 ALG11Q2TAA5 492 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 SMTNL2Q2TAL5 461 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 TBC1D25Q3MII6 688 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 SOWAHCQ53LP3 525 aaPredicted RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 TXNRD3NBQ6F5E7 133 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 LVRNQ6Q4G3 990 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 LIPIQ6XZB0 460 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 EFL1Q7Z2Z2 1120 aaKnown RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 SLC35F3Q8IY50 421 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 ARMC2Q8NEN0 867 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 TPCN2Q8NHX9 752 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 TSACCQ96A04 125 aaPredicted RBP9.78□□□□□ -0.84
VPS41-201ENST00000265745 CRELD1Q96HD1 420 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 ZNF599Q96NL3 588 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 CSPG4P5Q96PW8 444 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 DEPDC7Q96QD5 511 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.78□□□□□ -0.84
VPS41-201ENST00000265745 THAP2Q9H0W7 228 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 ETNK2Q9NVF9 386 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 SEPT3Q9UH03 358 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 OR1A2Q9Y585 309 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 TMEM131Q92545 1883 aa9.78□□□□□ -0.84
VPS41-201ENST00000265745 ITPR1Q14643 2758 aa9.77□□□□□ -0.84
VPS41-201ENST00000265745 A0A087X0T9 212 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 TTC24A2A3L6 582 aaPredicted RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 RRP8O43159 456 aaKnown RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 HTRA2O43464 458 aaPredicted RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 MAFKO60675 156 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 SERPING1P05155 500 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 MPOP05164 745 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 CYP1A2P05177 515 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 CELA2BP08218 269 aaPredicted RBP9.77□□□□□ -0.85
VPS41-201ENST00000265745 FAM228BP0C875 321 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 IL4RP24394 825 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 TRIM23P36406 574 aa9.77□□□□□ -0.85
VPS41-201ENST00000265745 ARL4AP40617 200 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms