RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 TRAFD1O14545 582 aaPredicted RBP16.57■□□□□ 0.24
USP13-201ENST00000263966 HAT1O14929 419 aa16.57■□□□□ 0.24
USP13-201ENST00000263966 SERPINE1P05121 402 aa16.57■□□□□ 0.24
USP13-201ENST00000263966 ACOT12Q8WYK0 555 aa16.57■□□□□ 0.24
USP13-201ENST00000263966 TNKS2Q9H2K2 1166 aa16.57■□□□□ 0.24
USP13-201ENST00000263966 GPN1Q9HCN4 374 aaPredicted RBP16.57■□□□□ 0.24
USP13-201ENST00000263966 GNEQ9Y223 722 aaKnown RBP16.57■□□□□ 0.24
USP13-201ENST00000263966 TTLL8A6PVC2 850 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 OR10H3O60404 316 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 ULK1O75385 1050 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 SGPL1O95470 568 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 SSR2P43308 183 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PSMD8P48556 350 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 RAB39AQ14964 217 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 DCLRE1BQ9H816 532 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 B3GAT2Q9NPZ5 323 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PRKAB1Q9Y478 270 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 ABCC3O15438 1527 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 WDR27A2RRH5 827 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 CAV3P56539 151 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PER3P56645 1201 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 KCTD8Q6ZWB6 473 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 OR2L3Q8NG85 312 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 GAD1Q99259 594 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 C1orf50Q9BV19 199 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 IFT46Q9NQC8 304 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 RBM12Q9NTZ6 932 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 BTN3A3O00478 584 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 TRIM38O00635 465 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PRKAR1AP10644 381 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 GYS2P54840 703 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PRKG2Q13237 762 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 IL18R1Q13478 541 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 KYAT3Q6YP21 454 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 ZNF730Q6ZMV8 503 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 DEFB107AQ8IZN7 70 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 ADAM32Q8TC27 787 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 TMEM27Q9HBJ8 222 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 ASTN2O75129 1339 aaPredicted RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 ERAL1O75616 437 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 NTRK1P04629 796 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 CDK16Q00536 496 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 HSDL1Q3SXM5 330 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 BICRALQ6AI39 1079 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 TMPRSS11AQ6ZMR5 421 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 TRDMT1O14717 391 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 GSC2O15499 205 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 OTCP00480 354 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PRR5P85299 388 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 C4orf46Q504U0 113 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 APTXQ7Z2E3 356 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 TMEM192Q8IY95 271 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 SETD7Q8WTS6 366 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 MAML3Q96JK9 1138 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 MRPS7Q9Y2R9 242 aaKnown RBP16.56■□□□□ 0.24
USP13-201ENST00000263966 ZNF536O15090 1300 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PCCBP05166 539 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 HNF4AP41235 474 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 PYDC2Q56P42 97 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 HERVK_113Q902F9 699 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 CDHR5Q9HBB8 845 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 SSR3Q9UNL2 185 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 ING4Q9UNL4 249 aa16.56■□□□□ 0.24
USP13-201ENST00000263966 CHST10O43529 356 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 SERPINA3P01011 423 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 CCL23P55773 120 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 SLC6A3Q01959 620 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 PSMD5Q16401 504 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 SHQ1Q6PI26 577 aaKnown RBP16.55■□□□□ 0.24
USP13-201ENST00000263966 QSOX2Q6ZRP7 698 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 ZNF527Q8NB42 609 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 HELQQ8TDG4 1101 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 PIGKQ92643 395 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 SEMA4DQ92854 862 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 EHD4Q9H223 541 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 ENY2Q9NPA8 101 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 NUDT5Q9UKK9 219 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 SNX7Q9UNH6 387 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 PGK1P00558 417 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 MAP2K5Q13163 448 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 NBPF12Q5TAG4 269 aaPredicted RBP16.55■□□□□ 0.24
USP13-201ENST00000263966 GPR156Q8NFN8 814 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 FAM58BPP0C7Q3 252 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 GDI2P50395 445 aaKnown RBP16.55■□□□□ 0.24
USP13-201ENST00000263966 SPIBQ01892 262 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 ZNF155Q12901 538 aaPredicted RBP16.55■□□□□ 0.24
USP13-201ENST00000263966 SLC9A4Q6AI14 798 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 TTI2Q6NXR4 508 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 CXCL17Q6UXB2 119 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 SPOCD1Q6ZMY3 1216 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 PIK3C3Q8NEB9 887 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 MEIS2O14770 477 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
USP13-201ENST00000263966 CAMTA2O94983 1202 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 CDH3P22223 829 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 DDX6P26196 483 aaKnown RBP eCLIP16.55■□□□□ 0.24
USP13-201ENST00000263966 CLCN7P51798 805 aa16.55■□□□□ 0.24
USP13-201ENST00000263966 AP3S2P59780 193 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms