RNA–Protein interactions for RNA: ENST00000263665.6

CNTN3-201, Transcript of contactin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTN3, Length 4,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-201ENST00000263665 LRIF1Q5T3J3 769 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 LIN54Q6MZP7 749 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 DNAJC24Q6P3W2 148 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 ZNF852Q6ZMS4 543 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 HPS6Q86YV9 775 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 GLYCTKQ8IVS8 523 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 DEPDC4Q8N2C3 294 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 LHFPL5Q8TAF8 219 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 NKX2-3Q8TAU0 364 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 SLCO2A1Q92959 643 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 NCOR1P1Q9H4R4 102 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 PPM1HQ9ULR3 514 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 NCKAP1Q9Y2A7 1128 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 MROH2AA6NES4 1674 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 DHRS12A0PJE2 317 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 AP3D1O14617 1153 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 KLF11O14901 512 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 FAM189A1O60320 539 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 PLOD3O60568 738 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 RP2O75695 350 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 PGRP06401 933 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 GPIP06744 558 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 DDOSTP39656 456 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 EIF2DP41214 584 aaKnown RBP6.89□□□□□ -1.31
CNTN3-201ENST00000263665 HADHBP55084 474 aaKnown RBP6.89□□□□□ -1.31
CNTN3-201ENST00000263665 PSME3P61289 254 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 ERVK-25P63136 954 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 ROR1Q01973 937 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 SLC3A1Q07837 685 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 DGCR6Q14129 220 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 KRT33BQ14525 404 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 DUSP6Q16828 381 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 CYP51A1Q16850 503 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 WSCD2Q2TBF2 565 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 CDNFQ49AH0 187 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 FBXO43Q4G163 708 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 RC3H1Q5TC82 1133 aaKnown RBP6.89□□□□□ -1.31
CNTN3-201ENST00000263665 CFAP206Q8IYR0 622 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 UBQLNLQ8IYU4 475 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 RBFAQ8N0V3 343 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 PPM1KQ8N3J5 372 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 PPHLN1Q8NEY8 458 aaKnown RBP6.89□□□□□ -1.31
CNTN3-201ENST00000263665 C3orf49Q96BT1 292 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 FAM167AQ96KS9 214 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 NPLQ9BXD5 320 aaPredicted RBP6.89□□□□□ -1.31
CNTN3-201ENST00000263665 ERVK-6Q9BXR3 956 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 TTYH3Q9C0H2 523 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 CHRAC1Q9NRG0 131 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 TMLHEQ9NVH6 421 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 PAK5Q9P286 719 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 ERVK-18Q9QC07 812 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 SLC9A2Q9UBY0 812 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 GGA1Q9UJY5 639 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 GNG8Q9UK08 70 aa6.89□□□□□ -1.31
CNTN3-201ENST00000263665 UBQLN1Q9UMX0 589 aaKnown RBP6.89□□□□□ -1.31
CNTN3-201ENST00000263665 COL15A1P39059 1388 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 LOC100506127A0A0U1RQW1 187 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 ARGFXA6NJG6 315 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 BBIP1A8MTZ0 92 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 MRASO14807 208 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 GMFGO60234 142 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 SUPT7LO94864 414 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 SLITRK5O94991 958 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 ATG7O95352 703 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 AP2A1O95782 977 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 HLA-DOAP06340 250 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 CCNYL3P0C7X3 344 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 MTHFD1P11586 935 aaKnown RBP6.88□□□□□ -1.31
CNTN3-201ENST00000263665 HLA-EP13747 358 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 ATP6V1B2P21281 511 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 CD72P21854 359 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 TBXAS1P24557 533 aaPredicted RBP6.88□□□□□ -1.31
CNTN3-201ENST00000263665 AXLP30530 894 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 HOXC9P31274 260 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 RPS9P46781 194 aaKnown RBP6.88□□□□□ -1.31
CNTN3-201ENST00000263665 KCNJ5P48544 419 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 HSD17B7P56937 341 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 HERVK_113P63132 956 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 IFRD2Q12894 506 aaPredicted RBP6.88□□□□□ -1.31
CNTN3-201ENST00000263665 GRAPQ13588 217 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 ISLR2Q6UXK2 745 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 CFAP77Q6ZQR2 320 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 PROSER1Q86XN7 944 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 PDZD9Q8IXQ8 264 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 ZNF34Q8IZ26 560 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 LNX2Q8N448 690 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 METTL25Q8N6Q8 603 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 ZNF540Q8NDQ6 660 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 IP6K1Q92551 441 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 CENPIQ92674 756 aaPredicted RBP6.88□□□□□ -1.31
CNTN3-201ENST00000263665 COL26A1Q96A83 441 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 LRFN5Q96NI6 719 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 PANX3Q96QZ0 392 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 CCDC106Q9BWC9 280 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 ZNF436Q9C0F3 470 aaPredicted RBP6.88□□□□□ -1.31
CNTN3-201ENST00000263665 UBE2TQ9NPD8 197 aaPredicted RBP6.88□□□□□ -1.31
CNTN3-201ENST00000263665 GRHL1Q9NZI5 618 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 KCND2Q9NZV8 630 aa6.88□□□□□ -1.31
CNTN3-201ENST00000263665 TULP4Q9NRJ4 1543 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms