RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 NPLOC4Q8TAT6 608 aa12.71□□□□□ -0.38
LIG1-201ENST00000263274 DNAJB14Q8TBM8 379 aa12.71□□□□□ -0.38
LIG1-201ENST00000263274 ANKRD49Q8WVL7 239 aa12.71□□□□□ -0.38
LIG1-201ENST00000263274 RMND5BQ96G75 393 aaPredicted RBP12.71□□□□□ -0.38
LIG1-201ENST00000263274 HAUS8Q9BT25 410 aa12.71□□□□□ -0.38
LIG1-201ENST00000263274 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.38
LIG1-201ENST00000263274 SP110Q9HB58 689 aa12.71□□□□□ -0.38
LIG1-201ENST00000263274 PCDHGA7Q9Y5G6 932 aa12.71□□□□□ -0.38
LIG1-201ENST00000263274 TSPAN3O60637 253 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PCSK1P29120 753 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PSEN2P49810 448 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PRKAA2P54646 552 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 TIGD5Q53EQ6 642 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 GPR152Q8TDT2 470 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 DDI1Q8WTU0 396 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 ABI2Q9NYB9 513 aaPredicted RBP12.7□□□□□ -0.38
LIG1-201ENST00000263274 PTTG2Q9NZH5 202 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 GTF2IRD1Q9UHL9 959 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 MYRFQ9Y2G1 1151 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 SMIM35A0A1B0GVV1 85 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 BTBD19C9JJ37 291 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 AP3B1O00203 1094 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 HSPA13P48723 471 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 CDC42EP1Q00587 391 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 SFSWAPQ12872 951 aaKnown RBP12.7□□□□□ -0.38
LIG1-201ENST00000263274 CBLBQ13191 982 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 IKBKEQ14164 716 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 HECTD2Q5U5R9 776 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 ESAMQ96AP7 390 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 SEPHS2Q99611 448 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PRM3Q9NNZ6 103 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 ENTPD7Q9NQZ7 604 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PAIP2BQ9ULR5 123 aaKnown RBP12.7□□□□□ -0.38
LIG1-201ENST00000263274 KCNH4Q9UQ05 1017 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 VWA7Q9Y334 891 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PLOD2O00469 737 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 INPP4BO15327 924 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 TRMUO75648 421 aaKnown RBP12.7□□□□□ -0.38
LIG1-201ENST00000263274 BAIAP3O94812 1187 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 LINC00032P0C843 101 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 KCNE1P15382 129 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 EEF1B2P24534 225 aaKnown RBP12.7□□□□□ -0.38
LIG1-201ENST00000263274 ESRRGP62508 458 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 DSC2Q02487 901 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 C14orf80Q86SX3 495 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 AHI1Q8N157 1196 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PTGR2Q8N8N7 351 aaPredicted RBP12.7□□□□□ -0.38
LIG1-201ENST00000263274 TRPC4APQ8TEL6 797 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 ISL2Q96A47 359 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 ASB9Q96DX5 294 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 KCNA7Q96RP8 456 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 RGS18Q9NS28 235 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 THEGQ9P2T0 379 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 DMTF1Q9Y222 760 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 FAM50BQ9Y247 325 aa12.7□□□□□ -0.38
LIG1-201ENST00000263274 PRSS51A0A1B0GVH4 220 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 C17orf102A2RUQ5 167 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 ARNTP27540 789 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 ECT2LQ008S8 904 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 CBX3Q13185 183 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 SQLEQ14534 574 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 POTEHQ6S545 545 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 CBR4Q8N4T8 237 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 PCYOX1LQ8NBM8 494 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 TBATAQ96M53 351 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 SLC25A23Q9BV35 468 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 SARS2Q9NP81 518 aaKnown RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 SEMA4BQ9NPR2 832 aaPredicted RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 ST3GAL5Q9UNP4 418 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 TIMM22Q9Y584 194 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 J3KR12 359 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 FBP2O00757 339 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 ACOT8O14734 319 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 RBP1P09455 135 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 COL6A2P12110 1019 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 POU4F1Q01851 419 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 SEMA3BQ13214 749 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 SAMD4BQ5PRF9 694 aaKnown RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 IQSEC1Q6DN90 963 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 OFCC1Q8IZS5 231 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 GABPB2Q8TAK5 448 aaPredicted RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 ZNF419Q96HQ0 510 aaPredicted RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 A0A087X1B8 175 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 A0A0J9YYE9 177 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 GIPC1O14908 333 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 CCNCP24863 283 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 AXLP30530 894 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 PGFP49763 221 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 SERPINH1P50454 418 aaKnown RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 RHDQ02161 417 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 YWHAHQ04917 246 aaPredicted RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 TMEM259Q4ZIN3 620 aa12.69□□□□□ -0.38
LIG1-201ENST00000263274 RAB44Q7Z6P3 723 aaPredicted RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 SPATA2LQ8IUW3 424 aaPredicted RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 CPSF7Q8N684 471 aaKnown RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 TMEM102Q8N9M5 508 aaPredicted RBP12.69□□□□□ -0.38
LIG1-201ENST00000263274 SHCBP1Q8NEM2 672 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms