RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 C12orf50Q8NA57 414 aaPredicted RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 GOT1L1Q8NHS2 421 aaPredicted RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 HSPBAP1Q96EW2 488 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 TMEM79Q9BSE2 394 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ASPSCR1Q9BZE9 553 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 WDR70Q9NW82 654 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 NMRK1Q9NWW6 199 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 CLIC5Q9NZA1 410 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 GPSM3Q9Y4H4 160 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 NRP1O14786 923 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ALBP02768 609 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 PRKACAP17612 351 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ERCC2P18074 760 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 FAM189BP81408 668 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 GAD2Q05329 585 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 INCA1Q0VD86 236 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 UPP1Q16831 310 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 USP41Q3LFD5 358 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 KCTD21Q4G0X4 260 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 MRNIPQ6NTE8 343 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 FUT10Q6P4F1 479 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 C10orf107Q8IVU9 208 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 JADE3Q92613 823 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 BADQ92934 168 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 LRRC39Q96DD0 335 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 SMARCD1Q96GM5 515 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 SUSD3Q96L08 255 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 CEP19Q96LK0 163 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 DACH2Q96NX9 599 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 LHX5Q9H2C1 402 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 WDR55Q9H6Y2 383 aaPredicted RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 CACYBPQ9HB71 228 aaKnown RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 C12orf4Q9NQ89 552 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 SPG21Q9NZD8 308 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ZNF212Q9UDV6 495 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 RNF112Q9ULX5 631 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 PCDHB5Q9Y5E4 795 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 TRIP12Q14669 1992 aaPredicted RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 PCP4L1A6NKN8 68 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 C2orf81A6NN90 581 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 TLL1O43897 1013 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 UNGP13051 313 aaPredicted RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 NFKB1P19838 968 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ME2P23368 584 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 NR2C2P49116 596 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 INPP1P49441 399 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 CTBP1Q13363 440 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 NFYCQ13952 458 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 PPM1JQ5JR12 505 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 CLLU1OSQ5K130 101 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 RNF219Q5W0B1 726 aaPredicted RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 LRRC8BQ6P9F7 803 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ELMSAN1Q6PJG2 1045 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 LCLAT1Q6UWP7 414 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ZBTB46Q86UZ6 589 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ULK2Q8IYT8 1036 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 ANKRD52Q8NB46 1076 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 RBM15BQ8NDT2 890 aaKnown RBP9.6□□□□□ -0.87
SIM1-201ENST00000262901 PSD4Q8NDX1 1056 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 STARD8Q92502 1023 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 HAPLN3Q96S86 360 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 C17orf80Q9BSJ5 609 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 LRMDAQ9H2I8 198 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 PCDHGC3Q9UN70 934 aa9.6□□□□□ -0.87
SIM1-201ENST00000262901 OR6C75A6NL08 312 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 INPP4BO15327 924 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 HDAC3O15379 428 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 NELFEP18615 380 aaKnown RBP9.59□□□□□ -0.87
SIM1-201ENST00000262901 PSMA4P25789 261 aaKnown RBP9.59□□□□□ -0.87
SIM1-201ENST00000262901 PEX6Q13608 980 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 VEPH1Q14D04 833 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 KHDC1Q4VXA5 237 aaKnown RBP9.59□□□□□ -0.87
SIM1-201ENST00000262901 GRTP1Q5TC63 336 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 VWA5B1Q5TIE3 1220 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 ZNF280BQ86YH2 543 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 TRPC4APQ8TEL6 797 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 FRS2Q8WU20 508 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 ERLEC1Q96DZ1 483 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 HGH1Q9BTY7 390 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 SPATA16Q9BXB7 569 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 TRIM54Q9BYV2 358 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 GRIP2Q9C0E4 1043 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 GPR88Q9GZN0 384 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 SDCBP2Q9H190 292 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 ATP13A3Q9H7F0 1226 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 OR12D3Q9UGF7 316 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 DOLKQ9UPQ8 538 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 PCDHGA3Q9Y5H0 932 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 SLC12A8A0AV02 714 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 SCAMP3O14828 347 aaKnown RBP9.59□□□□□ -0.87
SIM1-201ENST00000262901 TMEM63AO94886 807 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 ASMTLO95671 621 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 CXCL10P02778 98 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 LTFP02788 710 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 ANPEPP15144 967 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 AKT1P31749 480 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 GATMP50440 423 aa9.59□□□□□ -0.87
SIM1-201ENST00000262901 CCNG1P51959 295 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms