RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 MCMBPQ9BTE3 642 aa14.33□□□□□ -0.11
CUX2-201ENST00000261726 HMX1Q9NP08 348 aaPredicted RBP14.33□□□□□ -0.11
CUX2-201ENST00000261726 WBP11Q9Y2W2 641 aaKnown RBP14.33□□□□□ -0.11
CUX2-201ENST00000261726 MRPS23Q9Y3D9 190 aaKnown RBP14.33□□□□□ -0.11
CUX2-201ENST00000261726 A0A087X0B3 334 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 A0A0X1KG70 313 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 PGRMC2O15173 223 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 SLITRK3O94933 977 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 NOS2P35228 1153 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 FAM131AQ6UXB0 335 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 NET1Q7Z628 596 aaPredicted RBP14.33□□□□□ -0.12
CUX2-201ENST00000261726 AMIGO2Q86SJ2 522 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 AP3S1Q92572 193 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 ABCG4Q9H172 646 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 DHRS7Q9Y394 339 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 POLR3HQ9Y535 204 aaPredicted RBP14.33□□□□□ -0.12
CUX2-201ENST00000261726 TISP43B9A030 160 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 AVILO75366 819 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 HTR1BP28222 390 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 PTPRNQ16849 979 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 SDHAF4Q5VUM1 108 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 RTFDC1Q9BY42 306 aaPredicted RBP14.33□□□□□ -0.12
CUX2-201ENST00000261726 A0A0A0MRY4 1105 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 DCLK1O15075 740 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 CHADO15335 359 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 TCEA1P23193 301 aaKnown RBP14.33□□□□□ -0.12
CUX2-201ENST00000261726 RPS6KA3P51812 740 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 C5orf22Q49AR2 442 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 TMEM86AQ8N2M4 240 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 SAMD3Q8N6K7 520 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 NKX2-3Q8TAU0 364 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 CERS2Q96G23 380 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 SPATA13Q96N96 652 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 ZNF607Q96SK3 696 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 EGFL7Q9UHF1 273 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 JCADQ9P266 1359 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 RFXANKO14593 260 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 TFECO14948 347 aaPredicted RBP14.33□□□□□ -0.12
CUX2-201ENST00000261726 SLC35G4P0C7Q5 338 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 NELFEP18615 380 aaKnown RBP14.33□□□□□ -0.12
CUX2-201ENST00000261726 ARFIP1P53367 373 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 POU5F1Q01860 360 aaKnown RBP14.33□□□□□ -0.12
CUX2-201ENST00000261726 PIK3R6Q5UE93 754 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 FAM151BQ6UXP7 276 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 JAZF1Q86VZ6 243 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 NAT16Q8N8M0 369 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 NKIRAS2Q9NYR9 191 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 MARK1Q9P0L2 795 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 ASF1AQ9Y294 204 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 MON2Q7Z3U7 1717 aa14.33□□□□□ -0.12
CUX2-201ENST00000261726 DDX3XO00571 662 aaKnown RBP eCLIP14.32□□□□□ -0.12
CUX2-201ENST00000261726 SLC9A3R1O14745 358 aaPredicted RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 CNTN2Q02246 1040 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 HSF2Q03933 536 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 SWI5Q1ZZU3 235 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 OR52E6Q96RD3 313 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 RWDD3Q9Y3V2 267 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 CASKO14936 926 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 TGFB3P10600 412 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 GSTT1P30711 240 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 ELF3P78545 371 aaPredicted RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 GCNT1Q02742 428 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 SLC15A2Q16348 729 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 RBM23Q86U06 439 aaKnown RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 ZNF483Q8TF39 744 aaPredicted RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 PTCD2Q8WV60 388 aaKnown RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 PTCD3Q96EY7 689 aaKnown RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 PRDM8Q9NQV8 689 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 STOML2Q9UJZ1 356 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 SHBGP04278 402 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 SLC6A2P23975 617 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 MBTD1Q05BQ5 628 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 TRAP1Q12931 704 aaKnown RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 MEIOBQ8N635 442 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 GPR152Q8TDT2 470 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 ITCHQ96J02 903 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 ZYG11BQ9C0D3 744 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 MAPRE3Q9UPY8 281 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 SERPINB7O75635 380 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 IFNA6P05013 189 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 HNRNPLP14866 589 aaKnown RBP eCLIP14.32□□□□□ -0.12
CUX2-201ENST00000261726 MANFP55145 182 aaKnown RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 PIWIL2Q8TC59 973 aaKnown RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 CD101Q93033 1021 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 LINGO1Q96FE5 620 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 C5orf34Q96MH7 638 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 SEMA3CQ99985 751 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 KCNN2Q9H2S1 579 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D24Q9ULP9 559 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 ACTL7BQ9Y614 415 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 ATP6AP2A0A1C7CYW4 349 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 CDC40O60508 579 aaKnown RBP eCLIP14.32□□□□□ -0.12
CUX2-201ENST00000261726 ATP6AP2O75787 350 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 PIAS1O75925 651 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 DDNO94850 711 aaPredicted RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 TRUB2O95900 331 aaKnown RBP14.32□□□□□ -0.12
CUX2-201ENST00000261726 S100A6P06703 90 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 CAPGP40121 348 aa14.32□□□□□ -0.12
CUX2-201ENST00000261726 CLCN5P51795 746 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms