RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 HERC6Q8IVU3 1022 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 RNF148Q8N7C7 305 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 RNF169Q8NCN4 708 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 SLC29A1Q99808 456 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 RTP3Q9BQQ7 232 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 MAGEB5Q9BZ81 275 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 RPF2Q9H7B2 306 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 LRRC40Q9H9A6 602 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 ABCC13Q9NSE7 274 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 ARMC1Q9NVT9 282 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 BFARQ9NZS9 450 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 PCDHGA7Q9Y5G6 932 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 SLC30A1Q9Y6M5 507 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 PATJQ8NI35 1801 aa10.87□□□□□ -0.67
CHRNA1-201ENST00000261007 HEATR9A2RTY3 570 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 NEMP1O14524 444 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 FGF10O15520 208 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 AKAP10O43572 662 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TIMM44O43615 452 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 MGEA5O60502 916 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SNAP91O60641 907 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 POMCP01189 267 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 IGLV3-25P01717 112 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 C7P10643 843 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 PTPN3P26045 913 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 AFF1P51825 1210 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CSE1LP55060 971 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 NME5P56597 212 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 GRSF1Q12849 480 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TRIM71Q2Q1W2 868 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 ANKDD1AQ495B1 522 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TTC33Q6PID6 262 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CMC1Q7Z7K0 106 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SPATA2LQ8IUW3 424 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 DCP1BQ8IZD4 617 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CENPSQ8N2Z9 138 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 FAM47BQ8NA70 645 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 URGCPQ8TCY9 931 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TRUB1Q8WWH5 349 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 RNF34Q969K3 372 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SLCO4A1Q96BD0 722 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TMA16Q96EY4 203 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 MAELQ96JY0 434 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TCF12Q99081 682 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TUBA1CQ9BQE3 449 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CORO1BQ9BR76 489 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 NPLQ9BXD5 320 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 YTHDF1Q9BYJ9 559 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TKTL2Q9H0I9 626 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 GBA3Q9H227 469 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SEMA6AQ9H2E6 1030 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CATSPERBQ9H7T0 1116 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CXorf21Q9HAI6 301 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 RGS18Q9NS28 235 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 C20orf96Q9NUD7 363 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 ADA2Q9NZK5 511 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SELENONQ9NZV5 590 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SEPT10Q9P0V9 454 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 FNIP2Q9P278 1114 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 OR12D3Q9UGF7 316 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 ABT1Q9ULW3 272 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 MFHAS1Q9Y4C4 1052 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SNX13Q9Y5W8 968 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 COPG1Q9Y678 874 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TANC1Q9C0D5 1861 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TRPC5OSA6NMA1 111 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 GIPC1O14908 333 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 PIGNO95427 931 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 ZBTB11O95625 1053 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 AMHP03971 560 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CHRNGP07510 517 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 ERVK-10P10266 1014 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 COL6A1P12109 1028 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 PRKAR2AP13861 404 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 BDNFP23560 247 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 NPY2RP49146 381 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CCR3P51677 355 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CDH15P55291 814 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 SESN2P58004 480 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CTBSQ01459 385 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 YWHAHQ04917 246 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 ZBTB17Q13105 803 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 ARL13AQ5H913 290 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 MTX3Q5HYI7 312 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 FAM182AQ5T1J6 154 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 FSTL4Q6MZW2 842 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 HMBOX1Q6NT76 420 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 LINC00523Q86TU6 105 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TAC4Q86UU9 113 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 CAMK1DQ8IU85 385 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 LRRC49Q8IUZ0 686 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 LPGAT1Q92604 370 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 FUBP3Q96I24 572 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 AGAP3Q96P47 875 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TSGA13Q96PP4 275 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 NPAS2Q99743 824 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 NEURL2Q9BR09 285 aa10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 GPATCH1Q9BRR8 931 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-201ENST00000261007 TSEN34Q9BSV6 310 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms