RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 GRB7Q14451 532 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 MAPRE2Q15555 327 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 TIGD2Q4W5G0 525 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 SGO1Q5FBB7 561 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 PCID2Q5JVF3 399 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 PIWIL4Q7Z3Z4 852 aaKnown RBP12.02□□□□□ -0.49
USHBP1-201ENST00000252597 STK32CQ86UX6 486 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 PCED1BQ96HM7 432 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 ADI1Q9BV57 179 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 CASS4Q9NQ75 786 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 FADS3Q9Y5Q0 445 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 U3KQV3 271 aa12.02□□□□□ -0.49
USHBP1-201ENST00000252597 RBBP6Q7Z6E9 1792 aaKnown RBP12.01□□□□□ -0.49
USHBP1-201ENST00000252597 SLCO1B7G3V0H7 640 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 UBXN8O00124 270 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ACOT8O14734 319 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 B3GAT3O94766 335 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 IPO13O94829 963 aaKnown RBP12.01□□□□□ -0.49
USHBP1-201ENST00000252597 OCM2P0CE71 109 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 OCMP0CE72 109 aaPredicted RBP12.01□□□□□ -0.49
USHBP1-201ENST00000252597 PRSS56P0CW18 603 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 PRDX6P30041 224 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 DIO3P55073 304 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 C21orf59P57076 290 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 CDK18Q07002 472 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 INPP5AQ14642 412 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 STXBP5Q5T5C0 1151 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 BTBD8Q5XKL5 378 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 KLHL23Q8NBE8 558 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 SH3RF2Q8TEC5 729 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 SENP8Q96LD8 212 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 SLC25A23Q9BV35 468 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ZFYVE28Q9HCC9 887 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 TRNAU1APQ9NX07 287 aaKnown RBP12.01□□□□□ -0.49
USHBP1-201ENST00000252597 NDUFAF1Q9Y375 327 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 SOCS7O14512 581 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 PIP5K1BO14986 540 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 MYL3P08590 195 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 MAGP20916 626 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 HOXA11P31270 313 aaPredicted RBP12.01□□□□□ -0.49
USHBP1-201ENST00000252597 GSSP48637 474 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 FOXA1P55317 472 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 MCCD1P59942 119 aaPredicted RBP12.01□□□□□ -0.49
USHBP1-201ENST00000252597 BEX3Q00994 111 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 CBX3Q13185 183 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 NAB1Q13506 487 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 TAC4Q86UU9 113 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 TMEM40Q8WWA1 233 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 EXOC2Q96KP1 924 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 TCF12Q99081 682 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ACOX2Q99424 681 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 NPY6RQ99463 290 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 TBCDQ9BTW9 1192 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 EPS8L2Q9H6S3 715 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 AKTIPQ9H8T0 292 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 LTB4R2Q9NPC1 389 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 RGS18Q9NS28 235 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 DCLK1O15075 740 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 KPNA6O60684 536 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 GJB3O75712 270 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ATE1O95260 518 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 OR4Q2P0C623 313 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ELK4P28324 431 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 WNT3AP56704 352 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ARHGAP1Q07960 439 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 TSTD2Q5T7W7 516 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 UNC93AQ86WB7 457 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 DDHD1Q8NEL9 900 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ISOC1Q96CN7 298 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 SNX27Q96L92 541 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 PPM1MQ96MI6 270 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 MRPL57Q9BQC6 102 aaKnown RBP12.01□□□□□ -0.49
USHBP1-201ENST00000252597 PAAF1Q9BRP4 392 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 ZNF696Q9H7X3 374 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 USP3Q9Y6I4 520 aa12.01□□□□□ -0.49
USHBP1-201ENST00000252597 A0A087WXM4 84 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 A0A0U1RQS6 177 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 H2AFYO75367 372 aaKnown RBP12□□□□□ -0.49
USHBP1-201ENST00000252597 KATNA1O75449 491 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 SNAP29O95721 258 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 ALOX15P16050 662 aaPredicted RBP12□□□□□ -0.49
USHBP1-201ENST00000252597 UGT1A1P22309 533 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 UGT1A4P22310 534 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 UGT1A3P35503 534 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 UGT1A5P35504 534 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 KCNC1P48547 511 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 IST1P53990 364 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 RBBP7Q16576 425 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 SV2CQ496J9 727 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 HMBOX1Q6NT76 420 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 CCDC81Q6ZN84 652 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 KCTD8Q6ZWB6 473 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 MILR1Q7Z6M3 343 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 ZNF554Q86TJ5 538 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 CIR1Q86X95 450 aaPredicted RBP12□□□□□ -0.49
USHBP1-201ENST00000252597 DHRSXQ8N5I4 330 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 OR2T34Q8NGX1 318 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 OR2T3Q8NH03 318 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 ITFG2Q969R8 447 aa12□□□□□ -0.49
USHBP1-201ENST00000252597 C19orf60Q96EN9 201 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms