RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SCNN1BP51168 640 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 KPNA2P52292 529 aaKnown RBP21.76■■□□□ 1.07
CLN6-201ENST00000249806 CDH4P55283 916 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 ACTR3P61158 418 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 CUL3Q13618 768 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 SLC14A2Q15849 920 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 GPR158Q5T848 1215 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 BRSK1Q8TDC3 778 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 PDCD6IPQ8WUM4 868 aaKnown RBP21.76■■□□□ 1.07
CLN6-201ENST00000249806 PHF21BQ96EK2 531 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 TSPAN17Q96FV3 270 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 IGSF21Q96ID5 467 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 ZNF599Q96NL3 588 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 CWH43Q9H720 699 aa21.76■■□□□ 1.07
CLN6-201ENST00000249806 STX18Q9P2W9 335 aaKnown RBP21.76■■□□□ 1.07
CLN6-201ENST00000249806 GLP2RO95838 553 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 EPOP01588 193 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 SLC4A1P02730 911 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 ITGAXP20702 1163 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 CORO1AP31146 461 aaKnown RBP21.75■■□□□ 1.07
CLN6-201ENST00000249806 KCNC1P48547 511 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 EPHB1P54762 984 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 ACVR1Q04771 509 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 SLC34A1Q06495 639 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 MTA1Q13330 715 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 TRMT5Q32P41 509 aaKnown RBP21.75■■□□□ 1.07
CLN6-201ENST00000249806 SH2D4BQ5SQS7 431 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 GALNT7Q86SF2 657 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 EFCAB3Q8N7B9 438 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 MGME1Q9BQP7 344 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 A8MT66 165 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 CD3EAPO15446 510 aaKnown RBP21.75■■□□□ 1.07
CLN6-201ENST00000249806 NPHS1O60500 1241 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 CXCL10P02778 98 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 PRSS56P0CW18 603 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 DNAJB13P59910 316 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 PFKPQ01813 784 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 NSUN2Q08J23 767 aaKnown RBP eCLIP21.75■■□□□ 1.07
CLN6-201ENST00000249806 ASPHQ12797 758 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 NXNQ6DKJ4 435 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 ZNF549Q6P9A3 640 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 C16orf59Q7L2K0 433 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 DEFB107AQ8IZN7 70 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 SMIM14Q96QK8 99 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 TRIB3Q96RU7 358 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 SEZ6LQ9BYH1 1024 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 UBA2Q9UBT2 640 aaPredicted RBP21.75■■□□□ 1.07
CLN6-201ENST00000249806 VTI1BQ9UEU0 232 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 FIS1Q9Y3D6 152 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 BACE2Q9Y5Z0 518 aa21.75■■□□□ 1.07
CLN6-201ENST00000249806 LAMA3Q16787 3333 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 C2orf78A6NCI8 922 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 SCAMP3O14828 347 aaKnown RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 PDE5AO76074 875 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 HK2P52789 917 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 OXCT1P55809 520 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 PPM1LQ5SGD2 360 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 C6orf163Q5TEZ5 329 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 ALG1LQ6GMV1 187 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 KLC3Q6P597 504 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 ACAD11Q709F0 780 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 PIWIL4Q7Z3Z4 852 aaKnown RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 TMCO2Q7Z6W1 182 aaPredicted RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 PDZD8Q8NEN9 1154 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 ZNF461Q8TAF7 563 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 SCG3Q8WXD2 468 aaKnown RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 NAF1Q96HR8 494 aaKnown RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 MARK4Q96L34 752 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 PSKH2Q96QS6 385 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 CINPQ9BW66 212 aaPredicted RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 SEPT3Q9UH03 358 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 AFF4Q9UHB7 1163 aaKnown RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 CDYLQ9Y232 598 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 MICAL3Q7RTP6 2002 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 SLCO1B7G3V0H7 640 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 KDELR3O43731 214 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 IPO13O94829 963 aaKnown RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 NDST3O95803 873 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 ELF1P32519 619 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 BTG3Q14201 252 aaPredicted RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 ACAP2Q15057 778 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 EML3Q32P44 896 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 RNF168Q8IYW5 571 aaPredicted RBP21.74■■□□□ 1.07
CLN6-201ENST00000249806 KIRREL3Q8IZU9 778 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 FAM136AQ96C01 138 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 CATSPER2Q96P56 530 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 ALG9Q9H6U8 611 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 TNFRSF12AQ9NP84 129 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 GTSE1Q9NYZ3 720 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 TRPM5Q9NZQ8 1165 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 SPO11Q9Y5K1 396 aa21.74■■□□□ 1.07
CLN6-201ENST00000249806 CBX4O00257 560 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 RPP40O75818 363 aaKnown RBP21.73■■□□□ 1.07
CLN6-201ENST00000249806 WISP3O95389 354 aaPredicted RBP21.73■■□□□ 1.07
CLN6-201ENST00000249806 PIK3R1P27986 724 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 CDC25CP30307 473 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 PLD1Q13393 1074 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 FAM219BQ5XKK7 198 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 KLHDC10Q6PID8 442 aa21.73■■□□□ 1.07
CLN6-201ENST00000249806 ISCA2Q86U28 154 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms