RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 GPER1Q99527 375 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 CBWD1Q9BRT8 395 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 ACTR8Q9H981 624 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 IGSF9BQ9UPX0 1349 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 ABCA5Q8WWZ7 1642 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 OR6C70A6NIJ9 312 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 IL33O95760 270 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 LHCGRP22888 699 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 RPL19P84098 196 aaKnown RBP11.15□□□□□ -0.62
MSH6-201ENST00000234420 SF1Q15637 639 aaKnown RBP11.15□□□□□ -0.62
MSH6-201ENST00000234420 LPCAT4Q643R3 524 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 METTL7BQ6UX53 244 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 STOX1Q6ZVD7 989 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 CMTR2Q8IYT2 770 aaKnown RBP11.15□□□□□ -0.62
MSH6-201ENST00000234420 ACOT9Q9Y305 439 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 PCDHB5Q9Y5E4 795 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
MSH6-201ENST00000234420 SGTAO43765 313 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 RECQL5O94762 991 aaPredicted RBP11.15□□□□□ -0.63
MSH6-201ENST00000234420 CCNDBP1O95273 360 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 SERPINE1P05121 402 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 CTPS1P17812 591 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 CXCR2P25025 360 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 FDFT1P37268 417 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 ERVK-21P61565 698 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 FAM153CQ494X1 144 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 LRRN4CLQ8ND94 238 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 C1GALT1C1Q96EU7 318 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 CYP3A43Q9HB55 503 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 MID1IP1Q9NPA3 183 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 BARHL2Q9NY43 387 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 JCADQ9P266 1359 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 PZPP20742 1482 aa11.15□□□□□ -0.63
MSH6-201ENST00000234420 TMEM88BA6NKF7 163 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 WRBO00258 174 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SEC22BO75396 215 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 MPOP05164 745 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 TKTL1P51854 596 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 ZNHIT3Q15649 155 aaPredicted RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 FAM47BQ8NA70 645 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 GPR156Q8NFN8 814 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SPATA20Q8TB22 786 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 CRELD1Q96HD1 420 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SAV1Q9H4B6 383 aaPredicted RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 C15orf38-AP3S2A0A0A6YYH1 394 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 DDX3XO00571 662 aaKnown RBP eCLIP11.14□□□□□ -0.637e-19■■■■■ 42.4
MSH6-201ENST00000234420 RHOBTB3O94955 611 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 GLP2RO95838 553 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 PRKACAP17612 351 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SCNN1GP51170 649 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 TNK2Q07912 1038 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 MTA1Q13330 715 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 MPPE1Q53F39 396 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 ARPINQ7Z6K5 226 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SLC20A1Q8WUM9 679 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SMG7Q92540 1137 aaKnown RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 AVILO75366 819 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 CAMTA2O94983 1202 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 UNC5CO95185 931 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 RBP1P09455 135 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 RPL9P32969 192 aaKnown RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 MAPK8P45983 427 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 PKN1Q16512 942 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 CYP27C1Q4G0S4 372 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 LCN1P1Q5VSP4 162 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 C4orf22Q6V702 233 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 ATP13A1Q9HD20 1204 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 MED11Q9P086 117 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 NPTX2P47972 431 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 CD83Q01151 205 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 ZNF844Q08AG5 666 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 ACVR2BQ13705 512 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 TMC3Q7Z5M5 1100 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 PRMT6Q96LA8 375 aaPredicted RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 PPP1R2P1Q96PQ5 205 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SLC24A2Q9UI40 661 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 ALG5Q9Y673 324 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 WASF2Q9Y6W5 498 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 RIMS1Q86UR5 1692 aaKnown RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 OGFOD2Q6N063 350 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 ZC3H7AQ8IWR0 971 aaKnown RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 Q96MT0 163 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 TTLL2Q9BWV7 592 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 DCLK3Q9C098 648 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 HIPK3Q9H422 1215 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 PLK2Q9NYY3 685 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 HEMK1Q9Y5R4 338 aaPredicted RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 OAS3Q9Y6K5 1087 aaKnown RBP11.14□□□□□ -0.63
MSH6-201ENST00000234420 CAPN6Q9Y6Q1 641 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 TMEM2Q9UHN6 1383 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SAGE2PA6NJ88 616 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 IGSF6O95976 241 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 TPBGLP0DKB5 382 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 TUBP50607 506 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 NEK3P51956 506 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 PLK1P53350 603 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SLC5A3P53794 718 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 GARNL3Q5VVW2 1013 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 SLC22A9Q8IVM8 553 aa11.14□□□□□ -0.63
MSH6-201ENST00000234420 MSL3Q8N5Y2 521 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms