RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ENTPD5O75356 428 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 CCNYL3P0C7X3 344 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 RPL9P32969 192 aaKnown RBP17.92■□□□□ 0.46
EXTL3-201ENST00000220562 USP41Q3LFD5 358 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 SLC25A24Q6NUK1 477 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 SERPINA13PQ6UXR4 307 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 BBS12Q6ZW61 710 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 KRT74Q7RTS7 529 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 PARP8Q8N3A8 854 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 HDAC10Q969S8 669 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 OR10H1Q9Y4A9 318 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 AZIN1O14977 448 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 CTNNB1P35222 781 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 CRYBB1P53674 252 aaPredicted RBP17.92■□□□□ 0.46
EXTL3-201ENST00000220562 PCBP1Q15365 356 aaKnown RBP eCLIP17.92■□□□□ 0.46
EXTL3-201ENST00000220562 CROCCP3Q8IVE0 287 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 TCRBV9S1A1TA0A576 114 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 SPATA31C1P0DKV0 1188 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 RPL3P39023 403 aaKnown RBP17.92■□□□□ 0.46
EXTL3-201ENST00000220562 RGS1Q08116 209 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 DCLRE1AQ6PJP8 1040 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 KLHL24Q6TFL4 600 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 PACS1Q6VY07 963 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 LRRC49Q8IUZ0 686 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 SMYD1Q8NB12 490 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 ZNF398Q8TD17 642 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 PANX1Q96RD7 426 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 DEF8Q6ZN54 512 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 CDH24Q86UP0 819 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 SIX5Q8N196 739 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 EEF1AKMT1Q8WVE0 214 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 CRISPLD1Q9H336 500 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 GSTT1P30711 240 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 AMIGO2Q86SJ2 522 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 FNDC11Q9BVV2 318 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 FARP2O94887 1054 aaPredicted RBP17.92■□□□□ 0.46
EXTL3-201ENST00000220562 NUDT17P0C025 328 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 NPAS2Q99743 824 aa17.92■□□□□ 0.46
EXTL3-201ENST00000220562 H0Y858 1186 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 PGM3O95394 542 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 DBTP11182 482 aaKnown RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 NR1D2Q14995 579 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 YTHDF3Q7Z739 585 aaKnown RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 ADAMTSL2Q86TH1 951 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 ACSS3Q9H6R3 686 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 C3orf18Q9UK00 162 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 COL5A2P05997 1499 aaPredicted RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 OR10H3O60404 316 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 GRM5P41594 1212 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 NDUFA5Q16718 116 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 DEPDC4Q8N2C3 294 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 NARS2Q96I59 477 aaKnown RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 MFSD14AQ96MC6 490 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 OR52E6Q96RD3 313 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 MCM8Q9UJA3 840 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 ATP6AP2A0A1C7CYW4 349 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 GSAPA4D1B5 854 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 HDAC3O15379 428 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 ATP6AP2O75787 350 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 CLK3P49761 638 aaKnown RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 PLA2G4EQ3MJ16 856 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 BHLHB9Q6PI77 547 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 IRF2BP2Q7Z5L9 587 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 FAM35AQ86V20 835 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 MRPS23Q9Y3D9 190 aaKnown RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 SLC15A5A6NIM6 579 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 SNAP91O60641 907 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 CYP4B1P13584 511 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 IDO1P14902 403 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 FOLH1Q04609 750 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 CPSF6Q16630 551 aaKnown RBP eCLIP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 ALG11Q2TAA5 492 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 C9orf57Q5W0N0 161 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 CHPFQ8IZ52 775 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 TOP6BLQ8N6T0 577 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 JOSD2Q8TAC2 188 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 AKAP7Q9P0M2 348 aaPredicted RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 SLC17A7Q9P2U7 560 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 BTBD3Q9Y2F9 522 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 MROH2AA6NES4 1674 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 TP73O15350 636 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 KHDRBS3O75525 346 aaKnown RBP17.91■□□□□ 0.46
EXTL3-201ENST00000220562 EGFL7Q9UHF1 273 aa17.91■□□□□ 0.46
EXTL3-201ENST00000220562 QSOX1O00391 747 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 IGFBP4P22692 258 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 PSMD4P55036 377 aaKnown RBP17.9■□□□□ 0.46
EXTL3-201ENST00000220562 CDK18Q07002 472 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 FNBP1LQ5T0N5 605 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 ZNF662Q6ZS27 426 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 PIWIL4Q7Z3Z4 852 aaKnown RBP17.9■□□□□ 0.46
EXTL3-201ENST00000220562 IFNLR1Q8IU57 520 aaPredicted RBP17.9■□□□□ 0.46
EXTL3-201ENST00000220562 KLHL5Q96PQ7 755 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 RACGAP1Q9H0H5 632 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 UBAP1Q9NZ09 502 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 GIT1Q9Y2X7 761 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.9■□□□□ 0.46
EXTL3-201ENST00000220562 RFXANKO14593 260 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 FSCN2O14926 492 aa17.9■□□□□ 0.46
EXTL3-201ENST00000220562 SLC25A12O75746 678 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms