RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Cnot9Q9JKY0 299 aa7.29□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 H2afb3S4R1G7 115 aa7.29□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Ccdc88aQ5SNZ0 1873 aa7.29□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Col2a1P28481 1487 aa7.29□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Fam205a1D3YZF6 1314 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Acp4D3YTS9 425 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 9630041A04RikD3Z3U4 205 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Vmn2r91E9Q2U5 856 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 H2-T24F8VQG4 363 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Vmn1r86L7N213 316 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pip4k2aO70172 405 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Gh1P06880 216 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Hmox1P14901 289 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Gsta3P30115 221 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Pdcd2P46718 343 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Emp1P47801 160 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Atoh1P48985 351 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Eef2P58252 858 aaKnown RBP7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Mcm2P97310 904 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Agbl1Q09M05 972 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Zc3h18Q0P678 948 aaKnown RBP7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Ncbp1Q3UYV9 790 aaKnown RBP7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Cfhr2Q4LDF6 332 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 RgmaQ6PCX7 454 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Cdh24Q6PFX6 781 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Slc9c1Q6UJY2 1175 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Slc20a2Q80UP8 656 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Gcfc2Q8BKT3 769 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Grsf1Q8C5Q4 479 aaKnown RBP7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Q8K2W9 541 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Vmn1r219Q8R271 312 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Alas1Q8VC19 642 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Snapc2Q91XA5 359 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Cd209eQ91ZW7 208 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Scd3Q99PL7 359 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Prkrip1Q9CWV6 186 aaKnown RBP7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 GrapQ9CX99 217 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Adck1Q9D0L4 525 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 ClpxQ9JHS4 634 aaKnown RBP7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Nudt3Q9JI46 168 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Nrg4Q9WTX4 115 aa7.28□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Plcg1Q62077 1302 aa7.27□□□□□ -1.24
Ccdc54-201ENSMUST00000062439 Rasgef1aA0A0N4SVR5 498 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Igkv6-20A0A140T8P2 115 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Gm15155B1B034 138 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Klri1B2KG20 248 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Gm7257D3YX25 99 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Gm9507D3Z5T3 223 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Btbd16E9Q173 522 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Pagr1bF6V0H0 108 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Gm7942L7N277 499 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Slc32a1O35633 525 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Mmp10O55123 476 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Camk2aP11798 478 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 FgrP14234 517 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 F3P20352 294 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Ncf1Q09014 390 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 FcamrQ2TB54 535 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 H2-Q2Q4KN81 360 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Prss53Q571E5 552 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Tnfaip3Q60769 775 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Stxbp2Q64324 593 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Tex2Q6ZPJ0 1128 aaKnown RBP7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 CherpQ8CGZ0 936 aaKnown RBP7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Ipo11Q8K2V6 975 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Ero1bQ8R2E9 467 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Atl3Q91YH5 541 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Kctd10Q922M3 315 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Homer3Q99JP6 356 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Nmd3Q99L48 503 aaKnown RBP7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Pold4Q9CWP8 107 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Zswim1Q9CWV7 455 aaKnown RBP7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 MsraQ9D6Y7 233 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Rai14Q9EP71 979 aaKnown RBP7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Dock2Q8C3J5 1828 aa7.27□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 TicrrQ8BQ33 1889 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Cfap99A0A140LIX9 648 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Ripor3A1L3T7 938 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Kiaa1324A2AFS3 1009 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Fam186bD3Z420 943 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Zfp651E9PZ11 729 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 TazI7HJS2 263 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 CrcpO35427 148 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Cyp2d9P11714 504 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Man1a1P45700 655 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Plk2P53351 682 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Cln5Q3UMW8 341 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Zfp953Q3UPV7 304 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 L1td1Q587J6 782 aaKnown RBP7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Cxcl17Q5UW37 119 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Bcap29Q61334 240 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Fkbp10Q61576 581 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Ddx5Q61656 614 aaKnown RBP7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Dlg1Q811D0 905 aaKnown RBP7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Prkag3Q8BGM7 489 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Clip4Q8CI96 704 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Gtse1Q8R080 741 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Gimap3Q99MI6 301 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Grtp1Q9D3N8 359 aa7.26□□□□□ -1.25
Ccdc54-201ENSMUST00000062439 Usp12Q9D9M2 370 aa7.26□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms