RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Rpl10Q6ZWV3 214 aaKnown RBP9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tmcc2Q80W04 706 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mtg1Q8R2R6 326 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Zcchc12Q9CZA5 402 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 CenpsQ9D084 142 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Dlgap1Q9D415 992 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cyp3a41aQ9JMA7 504 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Trbv4A0A075B5I2 113 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 SmoktcrA2KF29 484 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 TriqkB2B9E1 86 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr652B9EHE6 318 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm3526E9PZM0 191 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 NoctO35710 429 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 EgfP01132 1217 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pim1P06803 397 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Serpina3kP07759 418 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ccnb1P24860 430 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 YwhahP68510 246 aaKnown RBP9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ctps2P70303 586 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 B3galnt2Q8BG28 504 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pgs1Q8BHF7 553 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Noc4lQ8BHY2 516 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Asrgl1Q8C0M9 326 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cypt1Q8CH20 168 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rem2Q8VEL9 341 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr866Q8VFI7 312 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 OoepQ9CWE6 164 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 SisF8VQM5 1818 aa9.77□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Phf11A6H5X4 337 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Skint6A7XUZ6 1240 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Prrt4B2RU40 902 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tmem45a2B7ZWJ5 289 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr414E9Q5P8 317 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 2610008E11RikG3X964 669 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Psmb10O35955 273 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ap3d1O54774 1199 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gnao1P18872 354 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rpl36P47964 105 aaKnown RBP9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pfdn6Q03958 127 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ifi47Q61635 420 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pramel7Q810Y8 479 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Thop1Q8C1A5 687 aaKnown RBP9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Wdr11Q8K1X1 1223 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 GrpQ8R1I2 146 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fbxo33Q8VE08 562 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Sec16bQ91XT4 1051 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Dctn2Q99KJ8 402 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Toe1Q9D2E2 511 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cpxm2Q9D2L5 764 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Stk19Q9JHN8 254 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fzd9Q9R216 592 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cyb561d2Q9WUE3 222 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ptchd4B9EKX1 904 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc4a5E9Q3M5 1116 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fpr-rs3O88537 343 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Stat5aP42230 793 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 NcstnP57716 708 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 PrkcgP63318 697 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rnf157Q3TEL6 685 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pcgf5Q3UK78 256 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 GnsQ8BFR4 544 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ace2Q8R0I0 805 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Akr1c13Q8VC28 323 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr1325Q8VF43 315 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rsl24d1Q99L28 163 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Ndufaf7Q9CWG8 436 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Chaf1bQ9D0N7 572 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Scube2Q9JJS0 997 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tdp2Q9JJX7 370 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slamf1Q9QUM4 343 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Hs6st1Q9QYK5 411 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Gm3752A6NAT4 150 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Olfr596F8VQ26 312 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc6a20bO88575 635 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tfap2aP34056 437 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Epb41P48193 858 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Rab26Q504M8 260 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Flot2Q60634 428 aaKnown RBP9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tnfaip2Q61333 691 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Kcna5Q61762 602 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Pcbp2Q61990 362 aaKnown RBP9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mef2dQ63943 514 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Cyp3a13Q64464 503 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 UstQ8BUB6 407 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Bmt2Q8BXK4 403 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 LnpepQ8C129 1025 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Tmc7Q8C428 726 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Acsm2Q8K0L3 575 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Slc6a20aQ8VDB9 592 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Fig4Q91WF7 907 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Golm1Q91XA2 393 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Syt12Q920N7 421 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 DhddsQ99KU1 333 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Smpd3Q9JJY3 655 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Dnaja2Q9QYJ0 412 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 CpqQ9WVJ3 470 aa9.76□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Lcn6A2AJB9 181 aa9.75□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Igf2bp1O88477 577 aaKnown RBP9.75□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 Mtnd4P03911 459 aa9.75□□□□□ -0.85
Pcdh1-201ENSMUST00000057185 GfapP03995 430 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms