RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 TMEM121BQ99MX7 572 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 AadacQ99PG0 398 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 4930524N10RikQ9D519 233 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Oma1Q9D8H7 521 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 IkbipQ9DBZ1 373 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Actn2Q9JI91 894 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pard6bQ9JK83 371 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Sema4fQ9Z123 777 aa8.76□□□□□ -1.01
Trim39-201ENSMUST00000042717 Baz2aQ91YE5 1889 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm31371A0A1D5RM70 265 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm597E9Q8J5 896 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cldn4O35054 210 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Diaph2O70566 1098 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mcpt4P21812 246 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Kpna2P52293 529 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Trim43bP86448 445 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 CamkmtQ3U2J5 323 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tax1bp1Q3UKC1 814 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Trim80Q3V061 624 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 HecaQ3V1N5 544 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Stard3Q61542 446 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Q6GQU0 248 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ssxb5Q6XAS2 159 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Zfp449Q8CB76 518 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Rell1Q8K2J7 272 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Vmn1r206Q8R277 312 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mlc1Q8VHK5 382 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ndufs1Q91VD9 727 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ubap2Q91VX2 1132 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ier5lQ99J55 406 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 NtpcrQ9CQA9 190 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Lsm7Q9CQQ8 103 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Rnf4Q9QZS2 194 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Myo1cQ9WTI7 1063 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mtm1Q9Z2C5 603 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 PtprdQ64487 1912 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Glipr1l3A0A1W2P7V2 236 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mroh7A2AVR2 1279 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fam46dB1ATX6 390 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ankrd34aB2RW11 495 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nxpe3B9EKK6 559 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cyp2j12G3UXT0 502 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Msh2P43247 935 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Aldh3a1P47739 453 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pebp1P70296 187 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cog7Q3UM29 770 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dyrk2Q5U4C9 599 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Hif1aQ61221 836 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Grid1Q61627 1009 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Bcl2l1Q64373 233 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Plk4Q64702 925 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nlrp9cQ66X01 1004 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Taf1cQ6PDZ2 836 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slc41a1Q8BJA2 512 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Slc6a17Q8BJI1 727 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nat14Q8BVG8 206 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Thop1Q8C1A5 687 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fem1cQ8CEF1 617 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mccc1Q99MR8 717 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmem80Q9D3H0 123 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 SyncQ9EPM5 470 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Pi16Q9ET66 489 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Grm3Q9QYS2 879 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Crlf3Q9Z2L7 442 aa8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Nup205A0A0J9YUD5 2061 aaKnown RBP8.75□□□□□ -1.01
Trim39-201ENSMUST00000042717 Olfr663A0A1B0GSI9 319 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 MndalD0QMC3 538 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 SelenovD3YXG1 328 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Adamts14E9PX39 1209 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm7275E9Q1B3 247 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Glyatl3E9Q5L8 290 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm6408J3QNG1 320 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm3402K7N5P2 326 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Entpd2O55026 495 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cxcr3O88410 367 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dsc1P55849 886 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mdga1Q0PMG2 940 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tmem184cQ3TPR7 525 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Mettl17Q3U2U7 461 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 MslnQ61468 625 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Cox14Q8BH51 57 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gabra5Q8BHJ7 463 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Elmo2Q8BHL5 732 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Ptk7Q8BKG3 1062 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Rbbp5Q8BX09 538 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Adamts2Q8C9W3 1213 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Tcaf2Q921K8 919 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Smarcd2Q99JR8 531 aaKnown RBP8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 IqcdQ9D3V1 458 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gpatch1Q9DBM1 930 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 MycbpQ9EQS3 103 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 CtsrQ9JIA9 334 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 B9d1Q9R1S0 204 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Unc80Q8BLN6 3261 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Fam155bA2BDP1 471 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dcpp2E9PYC2 171 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 5730507C01RikJ3QPX0 416 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Gm2888K7N746 267 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Dcpp1L7N1X9 171 aa8.74□□□□□ -1.01
Trim39-201ENSMUST00000042717 Eftud2O08810 971 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 61.6 ms