RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm43951A0A0N4SUT6 962 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 1810010D01RikA0A1L1SR87 51 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3259D3YUK0 475 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Alox8O35936 677 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fam167bP17257 162 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ccnd3P30282 292 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cbx2P30658 519 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Foxk1P42128 719 aaKnown RBP13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rpl36P47964 105 aaKnown RBP13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 EsrrgP62509 458 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ext2P70428 718 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Akr1c6P70694 323 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Dnajb14Q149L6 379 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mef2aQ60929 498 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Sema3cQ62181 751 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Map2k2Q63932 401 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 RetsatQ64FW2 609 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Arrdc3Q7TPQ9 414 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Olfr1062Q7TR71 315 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Olfr301Q7TS04 311 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fndc11Q80WB0 326 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ccdc116Q80X53 541 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cwf19l2Q8BG79 887 aaKnown RBP13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Strip2Q8C9H6 844 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Parp9Q8CAS9 866 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Impg1Q8R1W8 798 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Znf24Q91VN1 368 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cpxm2Q9D2L5 764 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Vmn2r-ps130A0A140T8U3 855 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 FancfE9Q5Z5 343 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm16427J3QN52 483 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm21738J3QP72 227 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm6614M0QWR8 670 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 LatO54957 242 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ptger1P35375 405 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Patl1Q3TC46 770 aaKnown RBP13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 TceancQ3US16 359 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Arhgap26Q6ZQ82 814 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tas2r125Q7M710 311 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 C6.1alQ7M757 291 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 InavaQ7TN12 663 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pabpc5Q8C7D3 381 aaKnown RBP13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fam160b1Q8CDM8 764 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zswim3Q8CFL8 695 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mterf1aQ8CHZ9 379 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zmiz2Q8CIE2 920 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Trpv3Q8K424 791 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Dnaaf1Q9D2H9 634 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 TrirQ9D735 173 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Armc1Q9D7A8 282 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 KelQ9EQF2 713 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slco1c1Q9ERB5 715 aa13.49□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fam81bA0A140LI28 432 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rhox3fA2ANE1 215 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Celf5D3Z4T1 395 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ifit3bE9PV48 403 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm10477F6SW83 55 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 P01668 110 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Got2P05202 430 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mup5P11591 180 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Asprv1Q09PK2 339 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Kctd21Q3URF8 260 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Serpina3gQ5I2A0 440 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 CcnhQ61458 323 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tlr12Q6QNU9 906 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Far2Q7TNT2 515 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Suz12Q80U70 741 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tecpr1Q80VP0 1166 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Clec2eQ80XD9 204 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mtrf1lQ8BJU9 373 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Wdr11Q8K1X1 1223 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Prmt7Q922X9 692 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ankrd61Q9CQM6 421 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Pinx1Q9CZX5 332 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Polr2aP08775 1970 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm3147A0A0J9YU88 481 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Gm4756A0A140LIS8 335 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rrn3B2RS91 656 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slc4a5E9Q3M5 1116 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Vmn2r88L7N1W8 857 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Tpst2O88856 376 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Myf6P15375 242 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 ZfaP23607 742 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 AxlQ00993 888 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 InipQ3TXT3 104 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fam83fQ3UKU4 495 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Etaa1Q5SVT3 877 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Q6GQU0 248 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cyp2d40Q6P8N9 338 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Ip6k1Q6PD10 433 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Fam120bQ6RI63 786 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Q80Y73 168 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Cnpy4Q8BQ47 245 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Camk1dQ8BW96 385 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Rbmx2Q8R0F5 326 aaKnown RBP13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Mtg1Q8R2R6 326 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Zfp65Q91W94 390 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Slco1a5Q91YY5 670 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 Adam33Q923W9 797 aa13.48□□□□□ -0.25
Nup88-201ENSMUST00000035283 PigxQ99LV7 254 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms