RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 NgrnQ99KS2 293 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nkd1Q99MH6 471 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Prl7c1Q9CRB5 251 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tmem114Q9D563 222 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Actrt2Q9D9L5 377 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Xrn2Q9DBR1 951 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Il22bQ9JJY8 179 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm5751A2AHC8 147 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 MndalD0QMC3 538 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc4a5E9Q3M5 1116 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam91a1Q3UVG3 837 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Olfml2bQ3V1G4 746 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sfmbt2Q5DTW2 938 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rassf5Q5EBH1 413 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm11487Q5RIS0 354 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nemp1Q6ZQE4 437 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Znf569Q80W31 679 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc41a1Q8BJA2 512 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Smarcal1Q8BJL0 910 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cnpy4Q8BQ47 245 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tm4sf4Q91XD3 202 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Chst12Q99LL3 419 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tex12Q9CR81 123 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam171a2A2A699 822 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pgbd1E9Q492 415 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Azin1O35484 448 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 ChgbP16014 677 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gjb1P28230 283 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 HpcaP84075 193 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 DsppP97399 934 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tmem63bQ3TWI9 832 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nr1d2Q60674 576 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 MogQ61885 246 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sema3cQ62181 751 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sh3rf1Q69ZI1 892 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ppp2r1bQ7TNP2 601 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Arrdc3Q7TPQ9 414 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Msantd1Q8BIL2 278 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lca5lQ8C0X0 741 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rdh13Q8CEE7 334 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ssh3Q8K330 649 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Akr1c20Q8VC77 323 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 ScgnQ91WD9 276 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ankrd54Q91WK7 299 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 PrkxQ922R0 355 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 NamptQ99KQ4 491 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 LiasQ99M04 373 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Trmt10bQ9D075 318 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q9D3J9 298 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nxnl2Q9D531 156 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Spata1Q9D5R4 444 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Bloc1s6Q9R0C0 172 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mkrn2osD3Z393 217 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ccdc7bE9Q9Y3 381 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Stk16O88697 305 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 PtpaP58389 323 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Grin2cQ01098 1239 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sox8Q04886 464 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sppl2bQ3TD49 578 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ifit3Q64345 403 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Dusp11Q6NXK5 321 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slitrk2Q810C0 846 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ldhal6bQ8BVP2 382 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pomgnt2Q8BW41 605 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sh3rf3Q8C120 878 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pitrm1Q8K411 1036 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Adgre4Q91ZE5 689 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ecrg4Q99LS0 148 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Arpc2Q9CVB6 300 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tmbim6Q9D2C7 237 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slamf8Q9D3G2 278 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rsph14Q9D3W1 341 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 4930513O06RikQ9D549 161 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam83dQ9D7I8 585 aa9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 QkiQ9QYS9 341 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fads2Q9Z0R9 444 aaKnown RBP9.97□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gucy2dA0A0U1RPR8 1117 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Grip2G3XA20 1042 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Elk4P41158 430 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ccr5P51682 354 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 TankP70347 448 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Zfp560Q3URI6 754 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Arhgap20Q6IFT4 1182 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam126aQ6P9N1 521 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Klhl17Q6TDP3 640 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Olfr295Q7TS08 309 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Creb3l2Q8BH52 521 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Teddm1bQ8CC62 306 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cnot6Q8K3P5 557 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 PhykplQ8R1K4 467 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc14a1Q8VHL0 384 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 WwoxQ91WL8 414 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lrp8Q924X6 996 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm5485A0A1D5RM98 91 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Kng1O08677 661 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cdh9P70407 786 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Kir3dl1P83555 432 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mapkapk3Q3UMW7 384 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Stxbp5lQ5DQR4 1185 aa9.96□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tmem199Q5SYH2 208 aa9.96□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms