RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 ThrbP37242 461 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Arpc4P59999 168 aaKnown RBP23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Q3UE31 404 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Arhgef38Q80VK6 770 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tecpr1Q80VP0 1166 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ndufs2Q91WD5 463 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 PlgrktQ9D3P8 147 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Mpp2Q9WV34 552 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 CcniQ9Z2V9 377 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Lrrc73B2RWC4 316 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tulp3O88413 460 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Akap3O88987 864 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gstm5P48774 224 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cdh5P55284 784 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Anxa4P97429 319 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ankrd52Q8BTI7 1076 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cpsf7Q8BTV2 471 aaKnown RBP23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Akr1c13Q8VC28 323 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Fbxo21Q8VDH1 627 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ppp1r16aQ923M0 524 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Acbd7Q9D258 88 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tbc1d21Q9D9D3 336 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Syde1Q9DBZ9 737 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Nek6Q9ES70 313 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Epm2aQ9WUA5 330 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Itgb5O70309 798 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Smpdl3bP58242 456 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 PrkciQ62074 595 aaKnown RBP23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Psd4Q8BLR5 1005 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Pex16Q91XC9 336 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Galk1Q9R0N0 392 aa23.23■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Chst3O88199 472 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Pax3P24610 479 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cyp2c39P56656 490 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gdpd4Q3TT99 632 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Rars2Q3U186 578 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Slc25a23Q6GQS1 467 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Rps9Q6ZWN5 194 aaKnown RBP23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Rsl1d1Q8BVY0 452 aaKnown RBP23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Rtp1Q8C8C1 263 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Saysd1Q8K190 188 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 HnrnpdlQ9Z130 301 aaKnown RBP23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Flvcr1B2RXV4 560 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Spon2Q8BMS2 330 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Il31raQ8K5B1 716 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 CrebzfQ91ZR3 358 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Decr1Q9CQ62 335 aaKnown RBP23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Mbd1Q9Z2E2 636 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Spin2-ps6A0A140T8V2 174 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Plk2P53351 682 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cnot6Q8K3P5 557 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Olfr170Q8VGL6 313 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Olfr1122Q8VGT9 326 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 PompQ9CQT5 141 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gm4450E9Q007 373 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Etv6P97360 485 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Prom2Q3UUY6 835 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 NkaplQ5SZT7 395 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Hsd3b4Q61767 373 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 PstkQ8BP74 359 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cnpy4Q8BQ47 245 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Pcdhgb1Q91XX8 918 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tcaf2Q921K8 919 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 2310003L06RikQ9CV82 495 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Dpy19l4A2AJQ3 722 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 BtrcQ3ULA2 605 aaKnown RBP23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Orai2Q8BH10 250 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Grik4Q8BMF5 956 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Ubxn6Q99PL6 442 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Dnajc19Q9CQV7 116 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gpc1Q9QZF2 557 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Htra1Q9R118 480 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Skp1Q9WTX5 163 aa23.22■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 4931408C20RikE9PWP9 1381 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Btnl6A2CG22 539 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Vmn2r72D3Z4N8 856 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 PurbO35295 324 aaKnown RBP23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Lhx5P61375 402 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Pi4k2aQ2TBE6 479 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Serac1Q3U213 654 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Mamdc2Q8CG85 686 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Washc1Q8VDD8 475 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 GhdcQ99J23 532 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Stk25Q9Z2W1 426 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gm17555F6U8B9 371 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gm28048F7BCN0 99 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tmem169Q8BG50 297 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Lrp8Q924X6 996 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Usp26Q99MX1 835 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cby3Q9CVN6 235 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Tmem114Q9D563 222 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cntd1Q9D995 334 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cib1Q9Z0F4 191 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Dip2cE9PWR4 1557 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Catsperg2C6KI89 1145 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Usp17ldG5E8G2 545 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Usp17lcG5E8I7 545 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Cd300lgQ1ERP8 331 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Kcnj11Q61743 390 aa23.21■■□□□ 1.31
Sh3rf1-201ENSMUST00000034060 Gabra5Q8BHJ7 463 aa23.21■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms