RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Rbp1Q00915 135 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 HdxQ14B70 692 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Ankrd34bQ3UUF8 508 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Akap14Q3V0I7 536 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Adora2aQ60613 410 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Wdr91Q7TMQ7 748 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Abraxas1Q8BPZ8 407 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Hmgn3Q9DCB1 99 aa18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Bag6Q9Z1R2 1154 aaKnown RBP18.83■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 5830411N06RikB3F5L4 1112 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Gm8257E9Q8R3 264 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Tespa1Q3U132 458 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Lingo3Q6GQU6 589 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Cd300aQ6SJQ0 318 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Ipo13Q8K0C1 963 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Rnf31Q924T7 1066 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Psip1Q99JF8 528 aaKnown RBP18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Snrpb2Q9CQI7 225 aaKnown RBP18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Pgm3Q9CYR6 542 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Stk19Q9JHN8 254 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Znhit2Q9QY66 399 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Cdh17Q9R100 827 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Nrf1Q9WU00 503 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 MrasO08989 208 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Atn1O35126 1175 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Kpna6O35345 536 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Limk2O54785 638 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Stam2O88811 523 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 HalP35492 657 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Elk4P41158 430 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Mtf2Q02395 593 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Fam117bQ3U3E2 584 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Lsg1Q3UM18 644 aaKnown RBP18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Rbm44Q3V089 1013 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Fam160a1Q505K2 1081 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Syce1lQ5D525 247 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Cspg5Q71M36 566 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Olfr1128Q7TR47 311 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Slco2b1Q8BXB6 683 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Tbc1d22aQ8R5A6 516 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Tmem135Q9CYV5 458 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Nt5cQ9JM14 200 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Rnf11Q9QYK7 154 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Casp8ap2Q9WUF3 1962 aa18.82■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Igkv10-96A0A140T8M1 115 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Grin3aA2AIR5 1135 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 OgdhlE9Q7L0 1029 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Zfp758E9QAA1 583 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Psmc3O88685 442 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 PuraP42669 321 aaKnown RBP18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Gpc4P51655 557 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 YwhaqP68254 245 aaKnown RBP18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Wdr36Q3TAQ9 899 aaKnown RBP18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Casc4Q6P2L7 435 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Smpd4Q6ZPR5 823 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Tmem121Q80XA0 318 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Ofcc1Q8BGX4 166 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Imp4Q8VHZ7 291 aaKnown RBP18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Cdyl2Q9D5D8 503 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 H2afb2S4R1M3 115 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Mfsd4b4J3QNS5 503 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Vmn2r46L7N282 809 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Kcnc1P15388 511 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Csf3rP40223 837 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 B3gat3P58158 335 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Txnl4aP83877 142 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Htr4P97288 388 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Smpd1Q04519 627 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Sap25Q1EHW4 186 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Cd163Q2VLH6 1121 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Axdnd1Q3UZ57 424 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Mocs1Q5RKZ7 636 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Fzd6Q61089 709 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Vmn1r191Q8K4D0 298 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Npffr2Q924H0 417 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Lrrc40Q9CRC8 602 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 MecrQ9DCS3 373 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Cldn3Q9Z0G9 219 aa18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Keap1Q9Z2X8 624 aaKnown RBP18.81■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 1700024B05RikE9Q6D7 167 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Tpst2O88856 376 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Cd9P40240 226 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Il12bP43432 335 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Man1a1P45700 655 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Impdh1P50096 514 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Serpinb5P70124 375 aaKnown RBP18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Ldb1P70662 411 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Rsrp1Q3UC65 298 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Slc22a23Q3UHH2 689 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 CcncQ62447 283 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Dpy19l3Q71B07 716 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Actr5Q80US4 605 aaKnown RBP18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Ccdc116Q80X53 541 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 StgQ8BM15 349 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 TpbglQ8C013 384 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Tnip2Q99JG7 430 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 CrotQ9DC50 612 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Smpd3Q9JJY3 655 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Gria3Q9Z2W9 888 aa18.8■□□□□ 0.6
Shkbp1-201ENSMUST00000003857 Pex10B1AUE5 324 aa18.79■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms